Experiment: MoLS4 with L-Histidine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1255 and DVU1256 are separated by 108 nucleotides DVU1256 and DVU1257 are separated by 378 nucleotides DVU1257 and glnN are separated by 146 nucleotides
DVU1255: DVU1255 - Sua5/YciO/YrdC/YwlC family protein (TIGR), at 1,341,261 to 1,341,893
DVU1255
DVU1256: DVU1256 - heptosyltransferase family protein (TIGR), at 1,342,002 to 1,342,979
DVU1256
DVU1257: DVU1257 - RNA-binding protein (TIGR), at 1,343,358 to 1,343,630
DVU1257
DVU1258: glnN - glutamine synthetase, type III (TIGR), at 1,343,777 to 1,345,957
glnN
Position (kb)
1342
1343 Strain fitness (log2 ratio)
-2
-1
0
1 at 1341.012 kb on - strand at 1341.093 kb on + strand at 1341.166 kb on - strand at 1341.829 kb on + strand, within DVU1255 at 1341.919 kb on + strand at 1341.933 kb on + strand at 1342.049 kb on - strand at 1342.154 kb on - strand, within DVU1256 at 1342.154 kb on - strand, within DVU1256 at 1342.154 kb on - strand, within DVU1256 at 1342.229 kb on + strand, within DVU1256 at 1342.248 kb on + strand, within DVU1256 at 1342.384 kb on + strand, within DVU1256 at 1342.445 kb on + strand, within DVU1256 at 1342.549 kb on - strand, within DVU1256 at 1342.596 kb on + strand, within DVU1256 at 1342.606 kb on + strand, within DVU1256 at 1342.639 kb on - strand, within DVU1256 at 1342.704 kb on - strand, within DVU1256 at 1342.732 kb on + strand, within DVU1256 at 1342.732 kb on + strand, within DVU1256 at 1342.824 kb on + strand, within DVU1256 at 1342.838 kb on + strand, within DVU1256 at 1342.918 kb on - strand at 1342.937 kb on + strand at 1342.945 kb on - strand at 1342.954 kb on + strand at 1343.002 kb on + strand at 1343.022 kb on + strand at 1343.042 kb on - strand at 1343.115 kb on + strand at 1343.123 kb on - strand at 1343.221 kb on + strand at 1343.249 kb on + strand at 1343.266 kb on + strand at 1343.435 kb on + strand, within DVU1257 at 1343.510 kb on + strand, within DVU1257 at 1343.707 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Histidine as nutrient 10mM remove 1,341,012 - -1.3 1,341,093 + -0.5 1,341,166 - -2.4 1,341,829 + DVU1255 0.90 -2.3 1,341,919 + +0.1 1,341,933 + -1.2 1,342,049 - -1.8 1,342,154 - DVU1256 0.16 -0.3 1,342,154 - DVU1256 0.16 +0.7 1,342,154 - DVU1256 0.16 +1.1 1,342,229 + DVU1256 0.23 -1.0 1,342,248 + DVU1256 0.25 -0.5 1,342,384 + DVU1256 0.39 -0.1 1,342,445 + DVU1256 0.45 -1.3 1,342,549 - DVU1256 0.56 -2.0 1,342,596 + DVU1256 0.61 -2.3 1,342,606 + DVU1256 0.62 +0.7 1,342,639 - DVU1256 0.65 -0.3 1,342,704 - DVU1256 0.72 +0.6 1,342,732 + DVU1256 0.75 -0.4 1,342,732 + DVU1256 0.75 -2.1 1,342,824 + DVU1256 0.84 -1.1 1,342,838 + DVU1256 0.85 -1.0 1,342,918 - -0.9 1,342,937 + +0.1 1,342,945 - -1.6 1,342,954 + -0.2 1,343,002 + -0.1 1,343,022 + +0.2 1,343,042 - -2.3 1,343,115 + -0.2 1,343,123 - -0.3 1,343,221 + -0.1 1,343,249 + -0.7 1,343,266 + +0.3 1,343,435 + DVU1257 0.28 -2.3 1,343,510 + DVU1257 0.56 -2.1 1,343,707 - +0.1
Or see this region's nucleotide sequence