Experiment: Motility_chemotaxis, R2A; outer cut
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_000255 and ABIE53_000256 are separated by 2 nucleotides ABIE53_000256 and ABIE53_000257 overlap by 38 nucleotides ABIE53_000257 and ABIE53_000258 are separated by 135 nucleotides ABIE53_000258 and ABIE53_000259 are separated by 81 nucleotides ABIE53_000259 and ABIE53_000260 are separated by 184 nucleotides
ABIE53_000255: ABIE53_000255 - F-type H+-transporting ATPase subunit delta, at 271,730 to 272,269
_000255
ABIE53_000256: ABIE53_000256 - ATP synthase F0 subunit b, at 272,272 to 272,517
_000256
ABIE53_000257: ABIE53_000257 - ATP synthase F0 subunit b, at 272,480 to 272,743
_000257
ABIE53_000258: ABIE53_000258 - F-type H+-transporting ATPase subunit c, at 272,879 to 273,148
_000258
ABIE53_000259: ABIE53_000259 - F-type H+-transporting ATPase subunit a, at 273,230 to 274,054
_000259
ABIE53_000260: ABIE53_000260 - ATP synthase protein I, at 274,239 to 274,793
_000260
Position (kb) 273
274
275 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 272.765 kb on - strand at 272.765 kb on - strand at 272.765 kb on - strand at 272.765 kb on - strand at 272.765 kb on - strand at 272.850 kb on - strand at 272.852 kb on - strand at 272.852 kb on - strand at 272.852 kb on - strand at 273.175 kb on - strand at 273.175 kb on - strand at 274.265 kb on - strand at 274.265 kb on - strand at 274.265 kb on - strand at 274.265 kb on - strand at 274.265 kb on - strand at 274.265 kb on - strand at 274.286 kb on - strand at 274.286 kb on - strand at 274.286 kb on - strand at 274.286 kb on - strand at 274.286 kb on - strand at 274.339 kb on - strand, within ABIE53_000260 at 274.506 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.508 kb on - strand, within ABIE53_000260 at 274.578 kb on - strand, within ABIE53_000260 at 274.647 kb on - strand, within ABIE53_000260 at 274.647 kb on - strand, within ABIE53_000260 at 274.647 kb on - strand, within ABIE53_000260 at 274.647 kb on - strand, within ABIE53_000260 at 274.653 kb on - strand, within ABIE53_000260 at 274.878 kb on - strand at 274.907 kb on + strand at 274.907 kb on + strand at 274.908 kb on - strand at 274.920 kb on - strand at 274.920 kb on - strand at 274.980 kb on + strand at 274.980 kb on + strand at 274.981 kb on - strand at 274.981 kb on - strand at 274.981 kb on - strand at 274.981 kb on - strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.986 kb on + strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 274.987 kb on - strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.041 kb on + strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.042 kb on - strand at 275.045 kb on + strand at 275.046 kb on - strand at 275.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_chemotaxis, R2A; outer cut remove 272,765 - -0.9 272,765 - -1.2 272,765 - -2.6 272,765 - -0.9 272,765 - -1.3 272,850 - +0.7 272,852 - -1.8 272,852 - -0.6 272,852 - -0.9 273,175 - -0.0 273,175 - +1.7 274,265 - -3.0 274,265 - -0.8 274,265 - -0.3 274,265 - -0.1 274,265 - -0.5 274,265 - -1.8 274,286 - -2.5 274,286 - -0.9 274,286 - +0.7 274,286 - -1.9 274,286 - +3.5 274,339 - ABIE53_000260 0.18 +0.2 274,506 - ABIE53_000260 0.48 +3.7 274,508 - ABIE53_000260 0.48 -3.0 274,508 - ABIE53_000260 0.48 -2.5 274,508 - ABIE53_000260 0.48 +2.3 274,508 - ABIE53_000260 0.48 +2.7 274,508 - ABIE53_000260 0.48 -2.3 274,508 - ABIE53_000260 0.48 -2.9 274,508 - ABIE53_000260 0.48 -4.1 274,508 - ABIE53_000260 0.48 -3.6 274,508 - ABIE53_000260 0.48 -5.1 274,508 - ABIE53_000260 0.48 -2.1 274,508 - ABIE53_000260 0.48 -0.6 274,578 - ABIE53_000260 0.61 -0.2 274,647 - ABIE53_000260 0.74 -1.6 274,647 - ABIE53_000260 0.74 -1.3 274,647 - ABIE53_000260 0.74 +0.7 274,647 - ABIE53_000260 0.74 +1.9 274,653 - ABIE53_000260 0.75 +0.2 274,878 - -2.1 274,907 + +1.7 274,907 + -1.3 274,908 - -0.9 274,920 - +0.2 274,920 - +1.2 274,980 + -0.3 274,980 + -1.9 274,981 - -2.8 274,981 - +1.7 274,981 - -0.3 274,981 - +1.5 274,986 + +0.1 274,986 + +0.5 274,986 + -2.6 274,986 + -0.3 274,986 + -1.6 274,986 + -1.1 274,986 + -1.5 274,986 + +0.7 274,986 + +2.3 274,986 + -3.4 274,986 + -0.3 274,986 + -0.5 274,986 + -1.9 274,987 - -2.3 274,987 - +0.7 274,987 - -3.9 274,987 - +2.3 274,987 - +0.3 274,987 - -1.3 274,987 - -1.8 274,987 - -0.3 274,987 - -0.4 275,041 + +0.4 275,041 + +0.5 275,041 + -2.4 275,041 + +0.7 275,041 + -1.6 275,041 + -1.9 275,041 + -1.3 275,041 + -1.3 275,041 + +2.7 275,041 + -0.1 275,041 + -1.3 275,042 - -1.1 275,042 - +0.7 275,042 - +0.7 275,042 - +1.7 275,042 - -2.5 275,042 - +4.4 275,042 - -1.6 275,042 - -0.9 275,042 - +3.3 275,042 - +1.4 275,042 - -2.8 275,042 - +0.5 275,042 - +0.0 275,042 - -2.5 275,042 - -0.1 275,042 - +1.4 275,045 + +0.0 275,046 - -2.5 275,046 - -3.0
Or see this region's nucleotide sequence