Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0449 and tRNA-Leu are separated by 279 nucleotides tRNA-Leu and ribF are separated by 482 nucleotides
DVU0449: DVU0449 - sensor/response regulator (TIGR), at 509,426 to 513,967
DVU0449
DVU_tRNA-Leu-2: tRNA-Leu - tRNA with anticodon CAG for Leu (VIMSS-AUTO), at 514,247 to 514,333
tRNA-Leu
DVU0450: ribF - riboflavin biosynthesis protein RibF (TIGR), at 514,816 to 515,760
ribF
Position (kb) 514
515 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 513.249 kb on - strand, within DVU0449 at 513.314 kb on + strand, within DVU0449 at 513.319 kb on + strand, within DVU0449 at 513.319 kb on + strand, within DVU0449 at 513.422 kb on + strand, within DVU0449 at 513.468 kb on - strand, within DVU0449 at 513.526 kb on + strand at 513.549 kb on - strand at 513.589 kb on - strand at 513.622 kb on + strand at 513.622 kb on + strand at 513.630 kb on - strand at 513.650 kb on - strand at 513.696 kb on + strand at 513.719 kb on + strand at 513.719 kb on + strand at 513.719 kb on + strand at 513.801 kb on + strand at 513.825 kb on - strand at 514.002 kb on + strand at 514.068 kb on + strand at 514.068 kb on + strand at 514.068 kb on + strand at 514.076 kb on - strand at 514.089 kb on + strand at 514.089 kb on + strand at 514.091 kb on - strand at 514.141 kb on - strand at 514.170 kb on + strand at 514.420 kb on - strand at 514.431 kb on - strand at 514.556 kb on - strand at 514.561 kb on + strand at 514.561 kb on + strand at 514.561 kb on + strand at 514.561 kb on + strand at 514.569 kb on - strand at 514.569 kb on - strand at 514.569 kb on - strand at 514.576 kb on + strand at 514.584 kb on - strand at 514.585 kb on + strand at 514.592 kb on - strand at 514.631 kb on + strand at 514.653 kb on + strand at 514.694 kb on - strand at 514.710 kb on + strand at 514.739 kb on + strand at 514.749 kb on + strand at 514.802 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 513,249 - DVU0449 0.84 -0.3 513,314 + DVU0449 0.86 +0.4 513,319 + DVU0449 0.86 +2.0 513,319 + DVU0449 0.86 -1.8 513,422 + DVU0449 0.88 -0.7 513,468 - DVU0449 0.89 -0.1 513,526 + +3.4 513,549 - +1.0 513,589 - -1.0 513,622 + +1.1 513,622 + -0.8 513,630 - -0.5 513,650 - +0.5 513,696 + +0.5 513,719 + +0.4 513,719 + +3.4 513,719 + -1.3 513,801 + -1.1 513,825 - -2.0 514,002 + +0.9 514,068 + -1.4 514,068 + -1.2 514,068 + -1.4 514,076 - -0.1 514,089 + +1.2 514,089 + +1.3 514,091 - +0.1 514,141 - -2.6 514,170 + -1.8 514,420 - +2.2 514,431 - -2.1 514,556 - -0.3 514,561 + -0.9 514,561 + -0.3 514,561 + -0.3 514,561 + -1.6 514,569 - -0.8 514,569 - +0.2 514,569 - +2.0 514,576 + +0.2 514,584 - -1.4 514,585 + -1.4 514,592 - +0.7 514,631 + -0.5 514,653 + -1.1 514,694 - -2.2 514,710 + -1.2 514,739 + +0.9 514,749 + -0.9 514,802 - -0.1
Or see this region's nucleotide sequence