Experiment: BHIS with Anhydrotetracycline 0.00078125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0265 and BT0266 are separated by 12 nucleotides BT0266 and BT0267 are separated by 282 nucleotides
BT0265: BT0265 - conserved hypothetical protein (NCBI ptt file), at 296,627 to 298,108
BT0265
BT0266: BT0266 - hypothetical protein (NCBI ptt file), at 298,121 to 299,581
BT0266
BT0267: BT0267 - two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file), at 299,864 to 303,976
BT0267
Position (kb) 298
299
300 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 297.121 kb on + strand, within BT0265 at 297.130 kb on - strand, within BT0265 at 297.130 kb on - strand, within BT0265 at 297.261 kb on + strand, within BT0265 at 297.262 kb on - strand, within BT0265 at 297.264 kb on - strand, within BT0265 at 297.265 kb on + strand, within BT0265 at 297.266 kb on - strand, within BT0265 at 297.300 kb on + strand, within BT0265 at 297.378 kb on - strand, within BT0265 at 297.448 kb on - strand, within BT0265 at 297.448 kb on - strand, within BT0265 at 297.451 kb on + strand, within BT0265 at 297.541 kb on + strand, within BT0265 at 297.541 kb on + strand, within BT0265 at 297.578 kb on - strand, within BT0265 at 297.607 kb on + strand, within BT0265 at 297.669 kb on - strand, within BT0265 at 297.669 kb on - strand, within BT0265 at 297.767 kb on - strand, within BT0265 at 297.780 kb on + strand, within BT0265 at 297.820 kb on + strand, within BT0265 at 297.885 kb on + strand, within BT0265 at 297.912 kb on - strand, within BT0265 at 297.997 kb on + strand at 298.095 kb on - strand at 298.136 kb on - strand at 298.139 kb on - strand at 298.142 kb on + strand at 298.165 kb on - strand at 298.207 kb on + strand at 298.210 kb on + strand at 298.240 kb on + strand at 298.271 kb on + strand, within BT0266 at 298.357 kb on + strand, within BT0266 at 298.499 kb on + strand, within BT0266 at 298.529 kb on + strand, within BT0266 at 298.582 kb on + strand, within BT0266 at 298.618 kb on + strand, within BT0266 at 298.693 kb on + strand, within BT0266 at 298.701 kb on - strand, within BT0266 at 298.719 kb on - strand, within BT0266 at 298.849 kb on - strand, within BT0266 at 298.985 kb on + strand, within BT0266 at 299.010 kb on + strand, within BT0266 at 299.010 kb on + strand, within BT0266 at 299.098 kb on + strand, within BT0266 at 299.098 kb on + strand, within BT0266 at 299.101 kb on - strand, within BT0266 at 299.272 kb on + strand, within BT0266 at 299.382 kb on - strand, within BT0266 at 299.491 kb on - strand at 299.516 kb on - strand at 299.516 kb on - strand at 299.585 kb on - strand at 299.686 kb on + strand at 299.687 kb on - strand at 299.687 kb on - strand at 299.875 kb on + strand at 299.954 kb on - strand at 299.958 kb on + strand at 299.959 kb on - strand at 300.013 kb on + strand at 300.133 kb on - strand at 300.232 kb on + strand at 300.244 kb on + strand at 300.247 kb on + strand at 300.430 kb on + strand, within BT0267 at 300.446 kb on + strand, within BT0267 at 300.461 kb on - strand, within BT0267 at 300.467 kb on - strand, within BT0267 at 300.556 kb on + strand, within BT0267
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Anhydrotetracycline 0.00078125 mM remove 297,121 + BT0265 0.33 -1.8 297,130 - BT0265 0.34 +0.2 297,130 - BT0265 0.34 -1.4 297,261 + BT0265 0.43 -2.4 297,262 - BT0265 0.43 -1.4 297,264 - BT0265 0.43 +0.1 297,265 + BT0265 0.43 -1.4 297,266 - BT0265 0.43 +0.2 297,300 + BT0265 0.45 -2.4 297,378 - BT0265 0.51 +0.8 297,448 - BT0265 0.55 -0.8 297,448 - BT0265 0.55 -1.4 297,451 + BT0265 0.56 -0.7 297,541 + BT0265 0.62 -1.4 297,541 + BT0265 0.62 +0.2 297,578 - BT0265 0.64 -1.6 297,607 + BT0265 0.66 -1.9 297,669 - BT0265 0.70 +2.2 297,669 - BT0265 0.70 +0.2 297,767 - BT0265 0.77 -2.4 297,780 + BT0265 0.78 +0.2 297,820 + BT0265 0.80 -0.8 297,885 + BT0265 0.85 +1.8 297,912 - BT0265 0.87 +0.2 297,997 + -2.6 298,095 - -3.1 298,136 - -1.4 298,139 - -1.4 298,142 + -0.5 298,165 - +1.2 298,207 + -0.2 298,210 + +0.2 298,240 + -2.1 298,271 + BT0266 0.10 -0.8 298,357 + BT0266 0.16 +1.2 298,499 + BT0266 0.26 -2.6 298,529 + BT0266 0.28 -0.2 298,582 + BT0266 0.32 -1.8 298,618 + BT0266 0.34 -2.8 298,693 + BT0266 0.39 +0.2 298,701 - BT0266 0.40 -1.4 298,719 - BT0266 0.41 -3.0 298,849 - BT0266 0.50 +1.2 298,985 + BT0266 0.59 -1.4 299,010 + BT0266 0.61 -0.7 299,010 + BT0266 0.61 -3.5 299,098 + BT0266 0.67 -2.1 299,098 + BT0266 0.67 -3.0 299,101 - BT0266 0.67 -0.4 299,272 + BT0266 0.79 +0.2 299,382 - BT0266 0.86 +0.2 299,491 - -0.8 299,516 - -0.4 299,516 - +1.8 299,585 - -0.8 299,686 + +0.8 299,687 - +1.2 299,687 - -0.1 299,875 + +2.2 299,954 - +0.9 299,958 + +0.2 299,959 - -0.9 300,013 + -0.8 300,133 - -1.7 300,232 + -1.2 300,244 + +0.2 300,247 + +0.2 300,430 + BT0267 0.14 +0.2 300,446 + BT0267 0.14 -0.8 300,461 - BT0267 0.15 +0.2 300,467 - BT0267 0.15 -1.2 300,556 + BT0267 0.17 -2.6
Or see this region's nucleotide sequence