Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0065 and DVUA0066 are separated by 453 nucleotides DVUA0066 and DVUA0067 are separated by 372 nucleotides
DVUA0065: DVUA0065 - sensor histidine kinase (TIGR), at 82,882 to 84,918
DVUA0065
DVUA0066: DVUA0066 - phospholipase, patatin family (TIGR), at 85,372 to 86,784
DVUA0066
DVUA0067: DVUA0067 - membrane protein, putative (TIGR), at 87,157 to 88,281
DVUA0067
Position (kb) 85
86
87 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 84.376 kb on + strand, within DVUA0065 at 84.386 kb on - strand, within DVUA0065 at 84.599 kb on + strand, within DVUA0065 at 84.599 kb on + strand, within DVUA0065 at 84.623 kb on + strand, within DVUA0065 at 84.668 kb on + strand, within DVUA0065 at 84.685 kb on + strand, within DVUA0065 at 84.712 kb on + strand, within DVUA0065 at 84.712 kb on + strand, within DVUA0065 at 84.713 kb on - strand, within DVUA0065 at 84.762 kb on + strand at 84.762 kb on + strand at 84.762 kb on + strand at 84.762 kb on + strand at 84.770 kb on - strand at 85.024 kb on - strand at 85.182 kb on + strand at 85.198 kb on - strand at 85.248 kb on + strand at 85.355 kb on - strand at 85.355 kb on - strand at 85.424 kb on - strand at 85.649 kb on - strand, within DVUA0066 at 85.755 kb on + strand, within DVUA0066 at 85.807 kb on + strand, within DVUA0066 at 85.807 kb on - strand, within DVUA0066 at 85.809 kb on + strand, within DVUA0066 at 85.817 kb on - strand, within DVUA0066 at 85.886 kb on - strand, within DVUA0066 at 85.920 kb on - strand, within DVUA0066 at 85.954 kb on + strand, within DVUA0066 at 85.971 kb on + strand, within DVUA0066 at 86.011 kb on - strand, within DVUA0066 at 86.066 kb on - strand, within DVUA0066 at 86.078 kb on - strand, within DVUA0066 at 86.093 kb on + strand, within DVUA0066 at 86.113 kb on + strand, within DVUA0066 at 86.121 kb on - strand, within DVUA0066 at 86.126 kb on - strand, within DVUA0066 at 86.126 kb on - strand, within DVUA0066 at 86.128 kb on + strand, within DVUA0066 at 86.128 kb on + strand, within DVUA0066 at 86.128 kb on + strand, within DVUA0066 at 86.133 kb on + strand, within DVUA0066 at 86.136 kb on - strand, within DVUA0066 at 86.136 kb on - strand, within DVUA0066 at 86.141 kb on - strand, within DVUA0066 at 86.168 kb on + strand, within DVUA0066 at 86.198 kb on + strand, within DVUA0066 at 86.238 kb on + strand, within DVUA0066 at 86.246 kb on - strand, within DVUA0066 at 86.258 kb on + strand, within DVUA0066 at 86.266 kb on - strand, within DVUA0066 at 86.266 kb on - strand, within DVUA0066 at 86.387 kb on + strand, within DVUA0066 at 86.387 kb on + strand, within DVUA0066 at 86.393 kb on + strand, within DVUA0066 at 86.393 kb on + strand, within DVUA0066 at 86.401 kb on - strand, within DVUA0066 at 86.411 kb on - strand, within DVUA0066 at 86.423 kb on + strand, within DVUA0066 at 86.433 kb on + strand, within DVUA0066 at 86.461 kb on + strand, within DVUA0066 at 86.490 kb on - strand, within DVUA0066 at 86.553 kb on + strand, within DVUA0066 at 86.606 kb on + strand, within DVUA0066 at 86.614 kb on - strand, within DVUA0066 at 86.672 kb on - strand at 86.707 kb on + strand at 86.765 kb on - strand at 86.780 kb on - strand at 87.076 kb on - strand at 87.215 kb on - strand at 87.409 kb on + strand, within DVUA0067
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 84,376 + DVUA0065 0.73 +1.9 84,386 - DVUA0065 0.74 -0.4 84,599 + DVUA0065 0.84 +0.2 84,599 + DVUA0065 0.84 +0.0 84,623 + DVUA0065 0.85 -0.5 84,668 + DVUA0065 0.88 +0.1 84,685 + DVUA0065 0.89 -1.2 84,712 + DVUA0065 0.90 +1.6 84,712 + DVUA0065 0.90 -1.5 84,713 - DVUA0065 0.90 -1.1 84,762 + -0.9 84,762 + -3.4 84,762 + +1.6 84,762 + -1.1 84,770 - +0.3 85,024 - -0.9 85,182 + -0.6 85,198 - +2.6 85,248 + -1.4 85,355 - +0.7 85,355 - +0.5 85,424 - -1.1 85,649 - DVUA0066 0.20 +1.5 85,755 + DVUA0066 0.27 +0.6 85,807 + DVUA0066 0.31 +0.3 85,807 - DVUA0066 0.31 -0.1 85,809 + DVUA0066 0.31 -0.8 85,817 - DVUA0066 0.31 +1.0 85,886 - DVUA0066 0.36 -0.6 85,920 - DVUA0066 0.39 +1.4 85,954 + DVUA0066 0.41 -0.3 85,971 + DVUA0066 0.42 +0.8 86,011 - DVUA0066 0.45 -1.3 86,066 - DVUA0066 0.49 -1.2 86,078 - DVUA0066 0.50 +2.9 86,093 + DVUA0066 0.51 +0.6 86,113 + DVUA0066 0.52 -0.8 86,121 - DVUA0066 0.53 +1.8 86,126 - DVUA0066 0.53 -0.6 86,126 - DVUA0066 0.53 +0.3 86,128 + DVUA0066 0.54 -0.3 86,128 + DVUA0066 0.54 -1.3 86,128 + DVUA0066 0.54 -1.3 86,133 + DVUA0066 0.54 +1.6 86,136 - DVUA0066 0.54 -0.2 86,136 - DVUA0066 0.54 -0.9 86,141 - DVUA0066 0.54 +4.9 86,168 + DVUA0066 0.56 -1.0 86,198 + DVUA0066 0.58 +2.9 86,238 + DVUA0066 0.61 +1.1 86,246 - DVUA0066 0.62 -0.5 86,258 + DVUA0066 0.63 +1.2 86,266 - DVUA0066 0.63 +1.3 86,266 - DVUA0066 0.63 -0.5 86,387 + DVUA0066 0.72 +0.3 86,387 + DVUA0066 0.72 -0.4 86,393 + DVUA0066 0.72 +0.1 86,393 + DVUA0066 0.72 -1.7 86,401 - DVUA0066 0.73 -0.8 86,411 - DVUA0066 0.74 +4.9 86,423 + DVUA0066 0.74 -0.6 86,433 + DVUA0066 0.75 -0.5 86,461 + DVUA0066 0.77 -0.2 86,490 - DVUA0066 0.79 +1.7 86,553 + DVUA0066 0.84 +2.1 86,606 + DVUA0066 0.87 +1.4 86,614 - DVUA0066 0.88 -1.7 86,672 - -1.3 86,707 + -0.8 86,765 - +0.2 86,780 - -3.0 87,076 - +1.2 87,215 - +0.4 87,409 + DVUA0067 0.22 -0.3
Or see this region's nucleotide sequence