Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2635 and DVU2636 are separated by 122 nucleotides DVU2636 and DVU2637 are separated by 62 nucleotides
DVU2635: DVU2635 - glycosyl transferase, group 1 family protein (TIGR), at 2,750,041 to 2,751,174
DVU2635
DVU2636: DVU2636 - hypothetical protein (TIGR), at 2,751,297 to 2,752,466
DVU2636
DVU2637: DVU2637 - HAMP domain protein (TIGR), at 2,752,529 to 2,753,992
DVU2637
Position (kb)
2751
2752
2753 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2751.325 kb on - strand at 2751.325 kb on - strand at 2751.522 kb on - strand, within DVU2636 at 2751.588 kb on - strand, within DVU2636 at 2751.713 kb on + strand, within DVU2636 at 2751.721 kb on - strand, within DVU2636 at 2751.728 kb on - strand, within DVU2636 at 2751.830 kb on - strand, within DVU2636 at 2751.871 kb on + strand, within DVU2636 at 2751.878 kb on + strand, within DVU2636 at 2751.878 kb on + strand, within DVU2636 at 2751.884 kb on - strand, within DVU2636 at 2751.886 kb on - strand, within DVU2636 at 2751.886 kb on - strand, within DVU2636 at 2751.886 kb on - strand, within DVU2636 at 2751.886 kb on - strand, within DVU2636 at 2751.940 kb on + strand, within DVU2636 at 2752.001 kb on - strand, within DVU2636 at 2752.085 kb on + strand, within DVU2636 at 2752.100 kb on + strand, within DVU2636 at 2752.106 kb on + strand, within DVU2636 at 2752.111 kb on - strand, within DVU2636 at 2752.157 kb on - strand, within DVU2636 at 2752.171 kb on - strand, within DVU2636 at 2752.193 kb on + strand, within DVU2636 at 2752.193 kb on + strand, within DVU2636 at 2752.347 kb on + strand, within DVU2636 at 2752.373 kb on - strand at 2752.391 kb on + strand at 2752.411 kb on - strand at 2752.411 kb on - strand at 2752.412 kb on - strand at 2752.431 kb on + strand at 2752.527 kb on + strand at 2752.527 kb on + strand at 2752.535 kb on - strand at 2752.668 kb on + strand at 2752.669 kb on - strand at 2752.676 kb on + strand, within DVU2637 at 2752.676 kb on - strand, within DVU2637 at 2752.676 kb on - strand, within DVU2637 at 2752.731 kb on - strand, within DVU2637 at 2752.797 kb on + strand, within DVU2637 at 2752.805 kb on - strand, within DVU2637 at 2752.878 kb on + strand, within DVU2637 at 2752.930 kb on - strand, within DVU2637 at 2752.951 kb on + strand, within DVU2637 at 2752.965 kb on + strand, within DVU2637 at 2752.973 kb on - strand, within DVU2637 at 2752.973 kb on - strand, within DVU2637 at 2752.975 kb on - strand, within DVU2637 at 2752.994 kb on + strand, within DVU2637 at 2752.994 kb on + strand, within DVU2637 at 2752.994 kb on + strand, within DVU2637 at 2752.996 kb on + strand, within DVU2637 at 2753.002 kb on - strand, within DVU2637 at 2753.004 kb on - strand, within DVU2637 at 2753.004 kb on - strand, within DVU2637 at 2753.004 kb on - strand, within DVU2637 at 2753.006 kb on + strand, within DVU2637 at 2753.048 kb on - strand, within DVU2637 at 2753.189 kb on + strand, within DVU2637 at 2753.211 kb on - strand, within DVU2637 at 2753.211 kb on - strand, within DVU2637 at 2753.272 kb on + strand, within DVU2637 at 2753.439 kb on + strand, within DVU2637 at 2753.444 kb on + strand, within DVU2637 at 2753.447 kb on - strand, within DVU2637
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 2,751,325 - +0.4 2,751,325 - +0.2 2,751,522 - DVU2636 0.19 -1.8 2,751,588 - DVU2636 0.25 -0.8 2,751,713 + DVU2636 0.36 -1.0 2,751,721 - DVU2636 0.36 +0.2 2,751,728 - DVU2636 0.37 +0.3 2,751,830 - DVU2636 0.46 +2.5 2,751,871 + DVU2636 0.49 -1.2 2,751,878 + DVU2636 0.50 +0.0 2,751,878 + DVU2636 0.50 -0.9 2,751,884 - DVU2636 0.50 -2.1 2,751,886 - DVU2636 0.50 -1.5 2,751,886 - DVU2636 0.50 +1.6 2,751,886 - DVU2636 0.50 +2.2 2,751,886 - DVU2636 0.50 -2.9 2,751,940 + DVU2636 0.55 +0.0 2,752,001 - DVU2636 0.60 -0.7 2,752,085 + DVU2636 0.67 +0.9 2,752,100 + DVU2636 0.69 -1.3 2,752,106 + DVU2636 0.69 -0.1 2,752,111 - DVU2636 0.70 -1.9 2,752,157 - DVU2636 0.74 +1.2 2,752,171 - DVU2636 0.75 -0.3 2,752,193 + DVU2636 0.77 -1.9 2,752,193 + DVU2636 0.77 -0.7 2,752,347 + DVU2636 0.90 +1.7 2,752,373 - -0.8 2,752,391 + +0.5 2,752,411 - -0.7 2,752,411 - +0.4 2,752,412 - -0.2 2,752,431 + -0.4 2,752,527 + +2.5 2,752,527 + +2.2 2,752,535 - +1.0 2,752,668 + +3.0 2,752,669 - -1.7 2,752,676 + DVU2637 0.10 +2.5 2,752,676 - DVU2637 0.10 -1.6 2,752,676 - DVU2637 0.10 -0.7 2,752,731 - DVU2637 0.14 -1.0 2,752,797 + DVU2637 0.18 -1.5 2,752,805 - DVU2637 0.19 +2.5 2,752,878 + DVU2637 0.24 +0.8 2,752,930 - DVU2637 0.27 -0.7 2,752,951 + DVU2637 0.29 -0.0 2,752,965 + DVU2637 0.30 -2.0 2,752,973 - DVU2637 0.30 +3.3 2,752,973 - DVU2637 0.30 +0.3 2,752,975 - DVU2637 0.30 -0.9 2,752,994 + DVU2637 0.32 +1.7 2,752,994 + DVU2637 0.32 -0.1 2,752,994 + DVU2637 0.32 -1.4 2,752,996 + DVU2637 0.32 -0.5 2,753,002 - DVU2637 0.32 -1.4 2,753,004 - DVU2637 0.32 +1.0 2,753,004 - DVU2637 0.32 +1.0 2,753,004 - DVU2637 0.32 -0.1 2,753,006 + DVU2637 0.33 -0.8 2,753,048 - DVU2637 0.35 +5.0 2,753,189 + DVU2637 0.45 +4.0 2,753,211 - DVU2637 0.47 -0.8 2,753,211 - DVU2637 0.47 -0.7 2,753,272 + DVU2637 0.51 +0.9 2,753,439 + DVU2637 0.62 +5.0 2,753,444 + DVU2637 0.62 -0.3 2,753,447 - DVU2637 0.63 +1.5
Or see this region's nucleotide sequence