Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0859 and DORF7832 are separated by 76 nucleotides DORF7832 and DVU0861 are separated by 170 nucleotides
DVU0859: DVU0859 - hypothetical protein (TIGR), at 949,376 to 950,656
DVU0859
DORF7832: DORF7832 - SEED: FIG00602569: hypothetical protein, at 950,733 to 952,319
DORF7832
DVU0861: DVU0861 - glycosyl transferase, group 1 family protein (TIGR), at 952,490 to 953,608
DVU0861
Position (kb) 950
951
952
953 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 949.783 kb on + strand, within DVU0859 at 949.800 kb on - strand, within DVU0859 at 949.806 kb on + strand, within DVU0859 at 949.857 kb on - strand, within DVU0859 at 949.937 kb on + strand, within DVU0859 at 949.943 kb on + strand, within DVU0859 at 950.000 kb on + strand, within DVU0859 at 950.000 kb on + strand, within DVU0859 at 950.085 kb on + strand, within DVU0859 at 950.129 kb on - strand, within DVU0859 at 950.129 kb on - strand, within DVU0859 at 950.165 kb on + strand, within DVU0859 at 950.584 kb on - strand at 950.646 kb on + strand at 950.654 kb on - strand at 950.687 kb on + strand at 950.700 kb on - strand at 950.715 kb on - strand at 950.720 kb on + strand at 950.720 kb on + strand at 950.720 kb on + strand at 950.761 kb on + strand at 950.772 kb on - strand at 950.772 kb on - strand at 950.914 kb on + strand, within DORF7832 at 950.937 kb on + strand, within DORF7832 at 951.012 kb on - strand, within DORF7832 at 951.028 kb on - strand, within DORF7832 at 951.064 kb on + strand, within DORF7832 at 951.081 kb on + strand, within DORF7832 at 951.223 kb on + strand, within DORF7832 at 951.231 kb on - strand, within DORF7832 at 951.283 kb on + strand, within DORF7832 at 951.309 kb on + strand, within DORF7832 at 951.374 kb on + strand, within DORF7832 at 951.489 kb on - strand, within DORF7832 at 951.608 kb on - strand, within DORF7832 at 951.649 kb on + strand, within DORF7832 at 951.663 kb on - strand, within DORF7832 at 951.699 kb on + strand, within DORF7832 at 951.857 kb on + strand, within DORF7832 at 951.857 kb on + strand, within DORF7832 at 951.877 kb on - strand, within DORF7832 at 951.941 kb on - strand, within DORF7832 at 951.960 kb on + strand, within DORF7832 at 952.059 kb on - strand, within DORF7832 at 952.152 kb on + strand, within DORF7832 at 952.154 kb on + strand, within DORF7832 at 952.228 kb on + strand at 952.306 kb on + strand at 952.314 kb on - strand at 952.361 kb on - strand at 952.373 kb on - strand at 952.405 kb on + strand at 952.418 kb on - strand at 952.462 kb on - strand at 952.546 kb on - strand at 952.596 kb on + strand at 952.708 kb on - strand, within DVU0861 at 952.713 kb on - strand, within DVU0861 at 952.740 kb on + strand, within DVU0861 at 952.743 kb on - strand, within DVU0861 at 952.743 kb on - strand, within DVU0861 at 952.748 kb on - strand, within DVU0861 at 952.760 kb on + strand, within DVU0861 at 952.892 kb on + strand, within DVU0861 at 953.075 kb on - strand, within DVU0861 at 953.124 kb on + strand, within DVU0861 at 953.124 kb on + strand, within DVU0861 at 953.126 kb on + strand, within DVU0861 at 953.129 kb on + strand, within DVU0861 at 953.134 kb on - strand, within DVU0861 at 953.134 kb on - strand, within DVU0861 at 953.134 kb on - strand, within DVU0861 at 953.137 kb on - strand, within DVU0861 at 953.198 kb on - strand, within DVU0861 at 953.226 kb on - strand, within DVU0861
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 949,783 + DVU0859 0.32 +1.0 949,800 - DVU0859 0.33 -1.2 949,806 + DVU0859 0.34 -0.2 949,857 - DVU0859 0.38 -0.2 949,937 + DVU0859 0.44 -0.3 949,943 + DVU0859 0.44 +0.4 950,000 + DVU0859 0.49 -0.5 950,000 + DVU0859 0.49 +0.4 950,085 + DVU0859 0.55 -0.4 950,129 - DVU0859 0.59 -0.7 950,129 - DVU0859 0.59 -0.6 950,165 + DVU0859 0.62 -0.3 950,584 - +1.1 950,646 + -0.1 950,654 - +0.4 950,687 + +0.5 950,700 - -0.2 950,715 - -0.6 950,720 + -0.8 950,720 + +1.9 950,720 + -0.8 950,761 + -1.4 950,772 - -1.0 950,772 - -0.6 950,914 + DORF7832 0.11 -1.6 950,937 + DORF7832 0.13 -0.8 951,012 - DORF7832 0.18 -1.3 951,028 - DORF7832 0.19 -0.2 951,064 + DORF7832 0.21 -1.3 951,081 + DORF7832 0.22 -0.9 951,223 + DORF7832 0.31 -1.8 951,231 - DORF7832 0.31 -0.5 951,283 + DORF7832 0.35 +2.7 951,309 + DORF7832 0.36 -0.9 951,374 + DORF7832 0.40 -1.2 951,489 - DORF7832 0.48 -1.1 951,608 - DORF7832 0.55 -1.4 951,649 + DORF7832 0.58 -1.1 951,663 - DORF7832 0.59 -1.8 951,699 + DORF7832 0.61 -1.2 951,857 + DORF7832 0.71 +0.3 951,857 + DORF7832 0.71 +0.8 951,877 - DORF7832 0.72 +1.5 951,941 - DORF7832 0.76 -1.9 951,960 + DORF7832 0.77 -0.6 952,059 - DORF7832 0.84 -0.8 952,152 + DORF7832 0.89 -0.4 952,154 + DORF7832 0.90 +2.5 952,228 + -1.7 952,306 + -1.5 952,314 - +0.9 952,361 - -1.2 952,373 - +1.5 952,405 + +2.2 952,418 - +1.6 952,462 - +0.3 952,546 - +1.0 952,596 + +1.5 952,708 - DVU0861 0.19 -2.3 952,713 - DVU0861 0.20 -0.3 952,740 + DVU0861 0.22 +2.2 952,743 - DVU0861 0.23 +1.8 952,743 - DVU0861 0.23 +4.0 952,748 - DVU0861 0.23 +0.1 952,760 + DVU0861 0.24 -0.5 952,892 + DVU0861 0.36 +1.0 953,075 - DVU0861 0.52 -1.4 953,124 + DVU0861 0.57 +1.1 953,124 + DVU0861 0.57 -1.4 953,126 + DVU0861 0.57 -0.3 953,129 + DVU0861 0.57 -0.5 953,134 - DVU0861 0.58 -0.3 953,134 - DVU0861 0.58 -0.9 953,134 - DVU0861 0.58 -1.0 953,137 - DVU0861 0.58 -0.4 953,198 - DVU0861 0.63 +0.7 953,226 - DVU0861 0.66 -0.8
Or see this region's nucleotide sequence