Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10080

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,039,415	-				+0.1
1,039,462	+				-1.4
1,039,470	-				+0.1
1,039,477	+		PGA1_c10060	0.11	-0.6
1,039,534	+		PGA1_c10060	0.26	+0.2
1,039,534	+		PGA1_c10060	0.26	+0.1
1,039,592	+		PGA1_c10060	0.42	+0.5
1,039,792	+				-1.3
1,039,885	+		PGA1_c10070	0.23	+0.5
1,039,888	-		PGA1_c10070	0.24	-0.4
1,039,941	+		PGA1_c10070	0.38	+0.3
1,039,948	+		PGA1_c10070	0.40	+0.7
1,039,948	+		PGA1_c10070	0.40	-0.2
1,039,948	+		PGA1_c10070	0.40	-1.7
1,039,949	+		PGA1_c10070	0.41	+0.6
1,039,949	+		PGA1_c10070	0.41	-0.1
1,039,949	+		PGA1_c10070	0.41	+0.0
1,040,038	+		PGA1_c10070	0.65	+0.2
1,040,038	+		PGA1_c10070	0.65	+0.2
1,040,176	+				-0.8
1,040,274	+				-2.2
1,040,279	-				+0.7
1,040,279	-				+0.5
1,040,279	-				+0.4
1,040,279	-				+1.2
1,040,375	+				-1.4
1,040,381	+				+0.5
1,040,479	+		PGA1_c10080	0.14	+2.0
1,040,492	-		PGA1_c10080	0.15	-0.2
1,040,526	-		PGA1_c10080	0.18	+2.6
1,040,536	+		PGA1_c10080	0.18	+0.1
1,040,573	+		PGA1_c10080	0.21	+0.8
1,040,583	-		PGA1_c10080	0.22	-1.7
1,040,673	+		PGA1_c10080	0.29	-0.4
1,040,721	+		PGA1_c10080	0.33	+1.2
1,040,783	+		PGA1_c10080	0.38	+1.1
1,040,791	+		PGA1_c10080	0.38	-1.0
1,040,794	+		PGA1_c10080	0.38	+0.4
1,040,900	-		PGA1_c10080	0.47	+0.8
1,040,971	+		PGA1_c10080	0.52	-0.8
1,040,971	+		PGA1_c10080	0.52	+0.6
1,040,979	-		PGA1_c10080	0.53	-0.0
1,041,026	+		PGA1_c10080	0.57	+3.4
1,041,026	+		PGA1_c10080	0.57	+0.1
1,041,034	-		PGA1_c10080	0.57	+0.5
1,041,034	-		PGA1_c10080	0.57	+0.9
1,041,034	-		PGA1_c10080	0.57	+1.3
1,041,034	-		PGA1_c10080	0.57	+1.1
1,041,042	-		PGA1_c10080	0.58	+0.7
1,041,070	+		PGA1_c10080	0.60	+0.7
1,041,085	-		PGA1_c10080	0.61	-1.4
1,041,091	-		PGA1_c10080	0.62	+1.7
1,041,161	+		PGA1_c10080	0.67	+2.0
1,041,183	+		PGA1_c10080	0.69	+1.3
1,041,375	+		PGA1_c10080	0.84	-1.4
1,041,433	+		PGA1_c10080	0.88	-0.8
1,041,516	-				+0.7
1,041,636	+		PGA1_c10090	0.11	+0.8
1,041,651	-		PGA1_c10090	0.12	+1.2
1,041,712	+		PGA1_c10090	0.18	+0.7
1,041,730	+		PGA1_c10090	0.20	-0.4
1,041,829	-		PGA1_c10090	0.29	+0.9
1,041,834	-		PGA1_c10090	0.30	+1.6
1,041,834	-		PGA1_c10090	0.30	-0.1
1,041,880	-		PGA1_c10090	0.34	+0.4
1,041,880	-		PGA1_c10090	0.34	-0.1
1,042,119	-		PGA1_c10090	0.56	-0.4
1,042,172	+		PGA1_c10090	0.61	-0.6
1,042,172	+		PGA1_c10090	0.61	+1.2
1,042,243	+		PGA1_c10090	0.68	+0.0
1,042,388	-		PGA1_c10090	0.81	-0.1
1,042,436	+		PGA1_c10090	0.86	-0.4
1,042,436	+		PGA1_c10090	0.86	-0.4