Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c08800

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
911,575	+				-2.4
911,656	+				+0.9
911,656	+				-1.2
911,656	+				+1.2
911,656	+				+1.4
911,656	+				+0.6
911,656	+				+1.7
911,656	+				+1.5
911,656	+				+1.0
911,656	+				-0.7
911,656	+				+0.0
911,664	-				-0.2
911,664	-				-2.7
911,664	-				-1.0
911,664	-				+0.9
911,664	-				-0.1
911,664	-				-1.5
911,664	-				+0.9
911,707	-				-1.0
911,717	-				+0.7
911,725	-				+1.3
911,760	+				+0.0
911,875	-		PGA1_c08810	0.22	+1.1
911,882	-		PGA1_c08810	0.25	-0.2
911,887	-		PGA1_c08810	0.26	+0.6
911,887	-		PGA1_c08810	0.26	+0.7
911,887	-		PGA1_c08810	0.26	-1.0
911,934	+		PGA1_c08810	0.42	-1.0
911,973	+		PGA1_c08810	0.55	+0.1
912,003	-		PGA1_c08810	0.65	+0.2
912,048	+		PGA1_c08810	0.80	+0.6
912,075	+		PGA1_c08810	0.89	+1.8
912,083	+				-1.4
912,101	+				-0.7
912,128	-				+1.4
912,168	-				-2.8
912,172	+				-1.7
912,218	+				-3.1
912,389	-		PGA1_c08820	0.26	+1.0
912,496	-		PGA1_c08820	0.42	+0.3
912,505	-		PGA1_c08820	0.43	-0.6
912,528	+		PGA1_c08820	0.46	+0.6
912,543	+		PGA1_c08820	0.49	+0.5
912,543	+		PGA1_c08820	0.49	+0.9
912,543	+		PGA1_c08820	0.49	+0.6
912,543	+		PGA1_c08820	0.49	-2.1
912,551	-		PGA1_c08820	0.50	-1.7
912,551	-		PGA1_c08820	0.50	-0.4
912,551	-		PGA1_c08820	0.50	-3.1