Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33080

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
3,465,407	-				+0.8
3,465,417	+				+1.2
3,465,422	+				+1.3
3,465,432	+				+1.9
3,465,518	-				+0.9
3,465,869	+		PGA1_c33070	0.44	+0.4
3,465,925	-		PGA1_c33070	0.51	-0.4
3,465,926	+		PGA1_c33070	0.51	+0.8
3,466,114	-		PGA1_c33070	0.73	-0.8
3,466,221	+		PGA1_c33070	0.85	+0.7
3,466,226	-		PGA1_c33070	0.86	+0.2
3,466,241	-		PGA1_c33070	0.88	-0.9
3,466,364	-				+0.4
3,466,364	-				-0.4
3,466,408	+				-0.6
3,466,470	+		PGA1_c33080	0.17	+0.7
3,466,473	-		PGA1_c33080	0.18	+1.3
3,466,473	-		PGA1_c33080	0.18	-0.7
3,466,473	-		PGA1_c33080	0.18	+0.3
3,466,564	+		PGA1_c33080	0.31	+0.1
3,466,602	+		PGA1_c33080	0.37	+0.1
3,466,675	+		PGA1_c33080	0.48	-3.2
3,466,683	-		PGA1_c33080	0.50	-1.5
3,466,756	+		PGA1_c33080	0.61	-0.3
3,466,764	-		PGA1_c33080	0.62	+0.1
3,466,783	+		PGA1_c33080	0.65	+0.6
3,466,804	+		PGA1_c33080	0.68	+0.8
3,466,806	-		PGA1_c33080	0.69	+0.1
3,466,812	-		PGA1_c33080	0.69	-1.8
3,466,812	-		PGA1_c33080	0.69	+1.0
3,466,876	-		PGA1_c33080	0.79	+0.1
3,466,891	+		PGA1_c33080	0.81	+3.1
3,466,913	+		PGA1_c33080	0.85	-2.1
3,466,918	+		PGA1_c33080	0.86	+0.7
3,466,918	+		PGA1_c33080	0.86	-0.8
3,466,918	+		PGA1_c33080	0.86	-1.4
3,466,938	+		PGA1_c33080	0.89	+1.2
3,466,967	+				-0.5
3,467,002	+				+0.6
3,467,012	+				-0.6
3,467,025	-				-0.5
3,467,088	+				+0.4
3,467,091	+				+0.1
3,467,110	+				+1.1
3,467,146	+				-1.4
3,467,146	+				+0.3
3,467,180	-				-2.5
3,467,180	-				+1.1
3,467,195	+		PGA1_c33090	0.11	-0.5
3,467,195	+		PGA1_c33090	0.11	-1.0
3,467,209	+		PGA1_c33090	0.14	-2.1
3,467,263	+		PGA1_c33090	0.27	-0.3
3,467,263	+		PGA1_c33090	0.27	-0.3
3,467,271	-		PGA1_c33090	0.29	+0.5
3,467,271	-		PGA1_c33090	0.29	+0.5
3,467,409	+		PGA1_c33090	0.63	+0.9
3,467,414	+		PGA1_c33090	0.64	-0.1
3,467,414	+		PGA1_c33090	0.64	+0.6
3,467,414	+		PGA1_c33090	0.64	+1.8
3,467,417	-		PGA1_c33090	0.64	+1.9
3,467,422	-		PGA1_c33090	0.66	-0.4
3,467,436	-		PGA1_c33090	0.69	-0.5
3,467,460	-		PGA1_c33090	0.75	-0.4
3,467,461	+		PGA1_c33090	0.75	+2.2
3,467,467	-		PGA1_c33090	0.77	-0.1
3,467,482	+		PGA1_c33090	0.80	+1.1
3,467,520	+		PGA1_c33090	0.89	+1.4
3,467,520	+		PGA1_c33090	0.89	+2.4
3,467,520	+		PGA1_c33090	0.89	+1.6
3,467,557	+				+1.3
3,467,560	-				+0.1
3,467,567	-				+0.2
3,467,575	-				-0.5
3,467,643	+				+0.1
3,467,695	+				-2.5
3,467,703	-				-0.0
3,467,736	+		PGA1_c33095	0.13	-0.7
3,467,736	-		PGA1_c33095	0.13	-1.6
3,467,795	-		PGA1_c33095	0.20	-0.5
3,467,802	+		PGA1_c33095	0.21	+0.3
3,467,802	+		PGA1_c33095	0.21	+0.6
3,467,806	-		PGA1_c33095	0.22	+1.2
3,467,828	+		PGA1_c33095	0.24	+0.3
3,467,833	+		PGA1_c33095	0.25	-3.2
3,467,963	+		PGA1_c33095	0.41	+0.1
3,467,963	+		PGA1_c33095	0.41	-1.3
3,467,968	+		PGA1_c33095	0.41	-0.3
3,467,971	-		PGA1_c33095	0.42	-1.6
3,467,973	+		PGA1_c33095	0.42	+0.8
3,467,976	-		PGA1_c33095	0.42	-1.1
3,467,981	-		PGA1_c33095	0.43	-0.3
3,467,981	-		PGA1_c33095	0.43	+0.8
3,467,981	-		PGA1_c33095	0.43	+0.9
3,468,007	-		PGA1_c33095	0.46	+0.3