Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31250

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
3,259,600	-				-0.7
3,259,606	+				+1.0
3,259,611	+				-0.7
3,259,611	+				-0.1
3,259,619	-				-0.5
3,259,619	-				+0.6
3,259,669	+				+0.8
3,259,671	+				-3.2
3,259,679	+				+0.4
3,259,681	-				+0.8
3,259,687	+				-0.0
3,259,690	+				-0.1
3,259,690	+				+0.3
3,259,690	+				-0.8
3,259,690	+				+1.5
3,259,692	+				-1.5
3,259,692	+				+0.2
3,259,697	+				+1.1
3,259,698	-				+1.1
3,259,698	-				+0.2
3,259,698	-				+0.4
3,259,700	-				-2.2
3,259,700	-				+0.1
3,259,701	+				-0.6
3,259,701	+				+1.3
3,259,701	+				+2.2
3,259,709	-				+0.2
3,259,709	-				+0.2
3,259,801	+				-0.1
3,259,801	+				-0.7
3,259,809	+				+0.0
3,259,817	+				+0.7
3,259,817	+				-0.3
3,259,817	+				+0.8
3,259,817	+				+0.0
3,259,818	-				-2.9
3,259,826	+				-2.8
3,259,832	+				-2.1
3,259,832	+				-0.2
3,259,841	-				-0.2
3,259,920	+				+0.1
3,259,946	+				+0.9
3,259,946	+				-2.1
3,259,949	-				+0.7
3,259,949	-				+0.8
3,259,954	-				-0.3
3,259,960	-				+0.9
3,259,967	+				+0.1
3,259,968	-				+1.2
3,259,975	-				-0.7
3,259,975	-				-0.7
3,259,975	-				+1.1
3,259,975	-				+0.0
3,260,013	-				-0.5
3,260,049	+				+1.3
3,260,049	+				-0.1
3,260,049	+				+0.6
3,260,049	+				+0.4
3,260,057	+				+0.1
3,260,057	-				-1.0
3,260,059	-				+0.4
3,260,064	+				+1.8
3,260,072	-				-2.1
3,260,072	-				+0.9
3,260,072	-				+1.9
3,260,074	+				+0.6
3,260,076	+				+0.0
3,260,076	+				-1.3
3,260,081	+				-0.7
3,260,081	+				+0.1
3,260,081	+				-1.3
3,260,084	-				+0.4
3,260,089	-				-0.8
3,260,089	-				+0.9
3,260,125	-				+0.7
3,260,135	+				-1.2
3,260,135	+				+1.2
3,260,135	+				+0.3
3,260,143	-				+0.2
3,260,143	-				+0.9
3,260,143	-				-1.9
3,260,143	-				-1.4
3,260,143	-				-0.7
3,260,143	-				-0.9
3,260,143	-				+0.7
3,260,143	-				+0.6
3,260,143	-				-0.2
3,260,143	-				-2.3
3,260,145	+				+1.9
3,260,148	-				-2.9
3,260,148	-				+0.8
3,260,148	-				-1.2
3,260,148	-				-0.1
3,260,148	-				+2.4
3,260,153	-				+0.4
3,260,153	-				+0.7
3,260,169	+				-2.3
3,260,169	+				-2.4
3,260,169	+				+0.6
3,260,169	+				-0.6
3,260,169	+				-1.0
3,260,169	+				-0.2
3,260,169	+				+0.9
3,260,169	+				-1.6
3,260,169	+				+1.7
3,260,169	+				+0.0
3,260,169	+				+0.6
3,260,169	+				-0.6
3,260,169	+				+0.2
3,260,169	+				+0.3
3,260,169	+				-1.1
3,260,169	+				-0.8
3,260,169	+				+0.3
3,260,169	+				+0.1
3,260,169	+				-1.0
3,260,169	+				-1.1
3,260,169	+				+0.2
3,260,169	+				+1.5
3,260,169	+				-1.7
3,260,169	+				+1.1
3,260,169	+				+0.9
3,260,169	+				+0.8
3,260,169	+				-0.5
3,260,169	+				-0.5
3,260,169	+				-0.5
3,260,169	+				-1.8
3,260,169	+				-0.5
3,260,169	+				-0.0
3,260,169	+				+0.9
3,260,169	+				-0.1
3,260,169	+				+1.4
3,260,169	+				+0.9
3,260,169	+				+1.2
3,260,169	+				-0.7
3,260,169	+				+0.7
3,260,169	+				+0.6
3,260,169	+				+0.5
3,260,169	+				-2.4
3,260,169	+				+0.9
3,260,177	-				-0.2
3,260,177	-				-2.9
3,260,177	-				-0.4
3,260,177	-				-0.3
3,260,177	-				+0.5
3,260,177	-				-0.3
3,260,177	-				+0.4
3,260,177	-				-0.2
3,260,177	-				-1.3
3,260,177	-				+0.9
3,260,177	-				+1.7
3,260,177	-				-1.6
3,260,177	-				+1.4
3,260,177	-				+1.1
3,260,177	-				-0.1
3,260,177	-				+0.1
3,260,177	-				-0.4
3,260,177	-				+1.1
3,260,177	-				-0.9
3,260,177	-				+1.2
3,260,177	-				+0.2
3,260,177	-				-0.2
3,260,177	-				-0.1
3,260,177	-				-0.2
3,260,177	-				+1.2
3,260,177	-				+0.5
3,260,177	-				-0.2
3,260,177	-				+0.9
3,260,177	-				+2.9
3,260,177	-				-1.7
3,260,177	-				+0.9
3,260,177	-				+0.6
3,260,177	-				-0.1
3,260,177	-				+0.7
3,260,177	-				+0.9
3,260,177	-				-0.4
3,260,177	-				-0.7
3,260,177	-				-1.6
3,260,177	-				+1.1
3,260,177	-				+0.3
3,260,204	-				+1.7
3,260,240	+				+0.7
3,260,248	-				+0.4
3,260,272	+				-0.7
3,260,284	-				-2.2
3,260,285	+				-1.3
3,260,287	+				+0.9
3,260,289	-				+0.2
3,260,289	-				+1.4
3,260,289	-				+1.2
3,260,312	-				-0.1
3,260,328	+				+0.7
3,260,336	-				+0.2
3,260,348	+				+1.1
3,260,348	+				+0.9
3,260,356	-				+1.2
3,260,382	-				+1.1
3,260,387	+				-0.8
3,260,400	+				+0.0
3,260,400	+				+0.4
3,260,400	+				+0.0
3,260,400	+				-1.2
3,260,401	-				+1.2
3,260,491	-				+1.8
3,260,493	+				-1.9
3,260,526	+				-0.8
3,260,543	+				-0.1
3,260,543	+				-1.7
3,260,543	+				-0.7
3,260,551	-				+0.2
3,260,551	-				-1.5
3,260,551	-				-3.0
3,260,551	-				-0.5
3,260,551	-				+0.3
3,260,575	-				-2.2
3,260,581	+				-0.7
3,260,587	+				+0.1
3,260,687	+		PGA1_c31250	0.14	-2.5
3,260,695	-		PGA1_c31250	0.16	-2.0
3,260,755	+		PGA1_c31250	0.25	-2.7
3,260,762	-		PGA1_c31250	0.27	+0.5
3,260,774	+		PGA1_c31250	0.29	-0.1
3,260,782	-		PGA1_c31250	0.30	+0.1
3,260,793	+		PGA1_c31250	0.32	-0.7
3,260,796	-		PGA1_c31250	0.32	-1.4
3,260,796	-		PGA1_c31250	0.32	-2.4
3,260,798	+		PGA1_c31250	0.32	-0.9
3,260,798	+		PGA1_c31250	0.32	-0.7
3,260,801	-		PGA1_c31250	0.33	-0.2
3,260,801	-		PGA1_c31250	0.33	-0.0
3,260,806	-		PGA1_c31250	0.34	-1.1
3,260,806	-		PGA1_c31250	0.34	-0.1
3,260,806	-		PGA1_c31250	0.34	-0.5
3,260,806	-		PGA1_c31250	0.34	-1.5
3,260,806	-		PGA1_c31250	0.34	-1.4
3,260,806	-		PGA1_c31250	0.34	+0.3
3,260,822	+		PGA1_c31250	0.36	+0.9
3,260,844	-		PGA1_c31250	0.40	-1.1
3,260,869	-		PGA1_c31250	0.44	-2.0
3,260,941	+		PGA1_c31250	0.55	-2.0
3,260,941	+		PGA1_c31250	0.55	-1.4
3,260,941	+		PGA1_c31250	0.55	+0.7
3,260,949	-		PGA1_c31250	0.57	+0.2
3,260,949	-		PGA1_c31250	0.57	-0.2
3,260,949	-		PGA1_c31250	0.57	+0.9
3,260,949	-		PGA1_c31250	0.57	-0.6
3,260,949	-		PGA1_c31250	0.57	+1.0
3,260,949	-		PGA1_c31250	0.57	-1.5
3,260,949	-		PGA1_c31250	0.57	-0.3
3,260,949	-		PGA1_c31250	0.57	-0.4
3,260,949	-		PGA1_c31250	0.57	-0.3
3,260,949	-		PGA1_c31250	0.57	-3.4
3,260,991	-		PGA1_c31250	0.63	+1.1
3,261,073	+		PGA1_c31250	0.77	+1.5
3,261,081	-		PGA1_c31250	0.78	+0.3
3,261,151	+		PGA1_c31250	0.89	+0.4
3,261,159	-				-1.7
3,261,159	-				-2.5
3,261,206	+				+0.2
3,261,222	+				-0.6
3,261,230	-				-0.7
3,261,248	-				+0.1
3,261,292	-				+1.4
3,261,294	+				+0.6
3,261,305	+				+0.5
3,261,320	-				+1.0
3,261,324	-				-0.3
3,261,338	+				+0.3
3,261,365	-				+2.5
3,261,396	+				+0.5
3,261,402	+				-0.6
3,261,402	+				-0.1
3,261,402	+				+1.4
3,261,402	+				+0.1
3,261,403	+				+1.1
3,261,404	+				+0.5
3,261,404	+				+0.7
3,261,410	-				+1.1
3,261,410	-				+1.4
3,261,481	+		PGA1_c31260	0.11	-0.3
3,261,507	+		PGA1_c31260	0.12	-2.1
3,261,531	+		PGA1_c31260	0.13	-1.7
3,261,533	-		PGA1_c31260	0.13	+0.6
3,261,538	-		PGA1_c31260	0.13	-1.9
3,261,674	+		PGA1_c31260	0.18	-1.4
3,261,761	-		PGA1_c31260	0.22	-0.2
3,261,783	+		PGA1_c31260	0.23	+0.9
3,261,783	+		PGA1_c31260	0.23	-0.4
3,261,787	-		PGA1_c31260	0.23	-0.6
3,261,793	-		PGA1_c31260	0.23	-0.7
3,261,805	+		PGA1_c31260	0.24	+2.2
3,261,809	+		PGA1_c31260	0.24	-0.3
3,261,810	+		PGA1_c31260	0.24	+0.9
3,261,810	+		PGA1_c31260	0.24	-0.3
3,261,810	+		PGA1_c31260	0.24	-0.5
3,261,810	+		PGA1_c31260	0.24	+0.1
3,261,810	+		PGA1_c31260	0.24	+0.0
3,261,810	+		PGA1_c31260	0.24	+0.1
3,261,810	+		PGA1_c31260	0.24	+0.4
3,261,810	+		PGA1_c31260	0.24	+1.3
3,261,818	-		PGA1_c31260	0.24	+0.1
3,261,818	-		PGA1_c31260	0.24	-0.1
3,261,818	-		PGA1_c31260	0.24	+0.5
3,261,818	-		PGA1_c31260	0.24	+1.6
3,261,828	-		PGA1_c31260	0.25	+0.2
3,261,830	+		PGA1_c31260	0.25	-0.1
3,261,885	-		PGA1_c31260	0.27	-0.3
3,261,906	-		PGA1_c31260	0.28	-1.1
3,261,906	-		PGA1_c31260	0.28	-0.5
3,261,906	-		PGA1_c31260	0.28	+0.8
3,261,911	-		PGA1_c31260	0.28	+1.9
3,261,917	-		PGA1_c31260	0.28	+0.8
3,261,917	-		PGA1_c31260	0.28	+1.1
3,261,942	-		PGA1_c31260	0.29	+0.8
3,261,977	-		PGA1_c31260	0.31	-0.8
3,261,977	-		PGA1_c31260	0.31	+0.3
3,261,987	-		PGA1_c31260	0.31	+0.2
3,261,987	-		PGA1_c31260	0.31	-2.0
3,261,991	+		PGA1_c31260	0.31	-2.7
3,261,994	+		PGA1_c31260	0.32	-1.7
3,261,996	+		PGA1_c31260	0.32	+0.1
3,262,019	+		PGA1_c31260	0.33	-0.4
3,262,027	-		PGA1_c31260	0.33	+1.6
3,262,059	+		PGA1_c31260	0.34	-0.3
3,262,062	-		PGA1_c31260	0.34	-0.1
3,262,119	-		PGA1_c31260	0.37	-0.2
3,262,155	-		PGA1_c31260	0.38	+1.8
3,262,171	-		PGA1_c31260	0.39	-0.7
3,262,187	+		PGA1_c31260	0.40	-0.2
3,262,188	+		PGA1_c31260	0.40	-1.7
3,262,191	-		PGA1_c31260	0.40	+1.2
3,262,195	+		PGA1_c31260	0.40	-0.2
3,262,196	-		PGA1_c31260	0.40	+0.5
3,262,217	+		PGA1_c31260	0.41	+0.4