Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29370

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
3,069,696	+				-2.1
3,069,729	+				-0.7
3,069,733	+				+1.0
3,069,734	-				-0.2
3,069,771	+				+1.2
3,069,799	+				+1.4
3,069,800	+				+0.3
3,069,805	+				+1.1
3,069,813	-				+0.3
3,069,813	-				-1.2
3,069,825	-				-2.5
3,069,848	+				-1.2
3,069,853	+				-0.7
3,069,861	-				-0.5
3,069,889	+				+0.7
3,069,889	-				-0.9
3,069,936	-				+0.8
3,069,952	+				+1.0
3,069,957	+				+0.9
3,069,965	-		PGA1_c29360	0.10	-0.2
3,069,965	-		PGA1_c29360	0.10	-0.2
3,069,982	+		PGA1_c29360	0.12	+1.2
3,070,023	+		PGA1_c29360	0.18	+2.4
3,070,076	+		PGA1_c29360	0.24	+1.6
3,070,106	+		PGA1_c29360	0.28	+0.3
3,070,114	-		PGA1_c29360	0.29	+4.4
3,070,177	-		PGA1_c29360	0.37	+1.1
3,070,242	+		PGA1_c29360	0.46	+0.4
3,070,251	-		PGA1_c29360	0.47	+0.4
3,070,310	+		PGA1_c29360	0.54	+0.4
3,070,318	-		PGA1_c29360	0.56	-0.7
3,070,435	-		PGA1_c29360	0.71	-1.2
3,070,543	-		PGA1_c29360	0.84	+1.1
3,070,621	-				+2.3
3,070,621	-				-0.7
3,070,625	+				+1.7
3,070,657	-				+1.3
3,070,657	-				+1.6
3,070,729	+		PGA1_c29370	0.12	+0.8
3,070,809	-		PGA1_c29370	0.25	+0.6
3,070,925	+		PGA1_c29370	0.44	-0.2
3,070,948	-		PGA1_c29370	0.48	-0.1
3,071,089	-		PGA1_c29370	0.71	-1.2
3,071,110	-		PGA1_c29370	0.75	-0.6
3,071,166	-		PGA1_c29370	0.84	-2.0
3,071,258	+				+0.5
3,071,390	+		PGA1_c29380	0.12	-0.4
3,071,432	-		PGA1_c29380	0.21	-2.0
3,071,464	-		PGA1_c29380	0.27	-1.5
3,071,486	+		PGA1_c29380	0.32	+1.3
3,071,541	+		PGA1_c29380	0.43	-0.6
3,071,549	-		PGA1_c29380	0.45	-0.4
3,071,664	+		PGA1_c29380	0.68	+0.7
3,071,756	-		PGA1_c29380	0.87	-0.2
3,071,756	-		PGA1_c29380	0.87	+0.4
3,071,788	+				+0.5
3,071,788	+				+0.3
3,071,812	+				+0.8
3,071,820	-				+0.6
3,071,820	-				+0.4
3,071,907	-				-0.9