Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25760

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
2,684,489	-		PGA1_c25750	0.48	-0.6
2,684,520	+		PGA1_c25750	0.50	-1.1
2,684,557	+		PGA1_c25750	0.52	+0.5
2,684,570	+		PGA1_c25750	0.53	+0.3
2,684,570	+		PGA1_c25750	0.53	+0.8
2,684,578	-		PGA1_c25750	0.53	-0.3
2,684,626	+		PGA1_c25750	0.56	+0.6
2,684,738	+		PGA1_c25750	0.62	+1.0
2,684,825	-		PGA1_c25750	0.67	+0.6
2,684,839	+		PGA1_c25750	0.68	-0.2
2,684,839	+		PGA1_c25750	0.68	-0.2
2,684,847	+		PGA1_c25750	0.69	-0.6
2,684,847	+		PGA1_c25750	0.69	-0.9
2,684,847	-		PGA1_c25750	0.69	-0.4
2,684,847	-		PGA1_c25750	0.69	-0.9
2,684,847	-		PGA1_c25750	0.69	-0.9
2,684,950	-		PGA1_c25750	0.75	+1.0
2,684,997	-		PGA1_c25750	0.77	+0.1
2,685,027	+		PGA1_c25750	0.79	-0.4
2,685,030	+		PGA1_c25750	0.79	-0.7
2,685,144	+		PGA1_c25750	0.86	+1.2
2,685,216	-		PGA1_c25750	0.90	-0.4
2,685,232	+				-0.4
2,685,322	+				+0.2
2,685,330	-				+1.2
2,685,333	+				+1.1
2,685,341	-				+0.4
2,685,361	-				+0.2
2,685,361	-				-2.5
2,685,482	-				+1.3
2,685,568	-		PGA1_c25760	0.13	-0.0
2,685,568	-		PGA1_c25760	0.13	-0.8
2,685,630	-		PGA1_c25760	0.19	+0.4
2,685,695	+		PGA1_c25760	0.26	-0.1
2,685,718	-		PGA1_c25760	0.28	-1.1
2,685,844	-		PGA1_c25760	0.41	+0.6
2,685,868	-		PGA1_c25760	0.44	-0.0
2,685,889	-		PGA1_c25760	0.46	-0.9
2,685,955	-		PGA1_c25760	0.53	+0.4
2,685,962	+		PGA1_c25760	0.53	-1.0
2,685,969	-		PGA1_c25760	0.54	+0.2
2,686,021	+		PGA1_c25760	0.59	-3.4
2,686,071	-		PGA1_c25760	0.64	-1.0
2,686,126	-		PGA1_c25760	0.70	+0.4
2,686,166	+		PGA1_c25760	0.74	-0.8
2,686,202	+		PGA1_c25760	0.78	+0.6
2,686,202	+		PGA1_c25760	0.78	-3.9
2,686,210	-		PGA1_c25760	0.79	-0.3
2,686,210	-		PGA1_c25760	0.79	+0.3
2,686,212	+		PGA1_c25760	0.79	-1.9
2,686,214	+		PGA1_c25760	0.79	+0.6
2,686,222	-		PGA1_c25760	0.80	-2.4
2,686,258	+		PGA1_c25760	0.84	-0.6
2,686,271	-		PGA1_c25760	0.85	+0.9
2,686,421	+				-1.1
2,686,428	+				-0.9
2,686,430	+				-2.5
2,686,508	+				-0.4
2,686,509	+				-0.8
2,686,509	+				+1.2
2,686,509	+				+0.2
2,686,510	+				+1.1
2,686,542	+				+1.7
2,686,581	-		PGA1_c25770	0.13	+1.1
2,686,596	-		PGA1_c25770	0.15	+0.8
2,686,620	-		PGA1_c25770	0.20	-0.6
2,686,650	+		PGA1_c25770	0.25	-0.1
2,686,655	+		PGA1_c25770	0.26	+1.3
2,686,666	-		PGA1_c25770	0.28	+0.3
2,686,726	-		PGA1_c25770	0.39	-0.3
2,686,726	-		PGA1_c25770	0.39	-1.4
2,686,789	+		PGA1_c25770	0.51	+0.3
2,686,789	+		PGA1_c25770	0.51	-0.1
2,686,789	+		PGA1_c25770	0.51	-2.9
2,686,809	+		PGA1_c25770	0.54	+0.4
2,686,812	-		PGA1_c25770	0.55	+0.6
2,686,825	+		PGA1_c25770	0.57	+0.3
2,686,843	-		PGA1_c25770	0.61	-0.5
2,686,860	-		PGA1_c25770	0.64	-0.8
2,686,901	+		PGA1_c25770	0.71	-0.2
2,686,909	-		PGA1_c25770	0.73	+1.1
2,686,934	+		PGA1_c25770	0.77	-0.2
2,686,942	-		PGA1_c25770	0.79	-0.2
2,686,994	-		PGA1_c25770	0.88	-0.3
2,687,011	+				+0.3
2,687,026	+				+1.6
2,687,026	+				-0.5
2,687,026	+				+0.4
2,687,026	+				+0.8
2,687,026	+				+0.4
2,687,026	+				-1.2
2,687,028	-				+0.2
2,687,034	-				+0.9
2,687,034	-				+0.5
2,687,034	-				-1.7
2,687,064	+				+1.0
2,687,064	+				+2.4
2,687,064	+				+2.3
2,687,064	+				-1.4
2,687,072	-				+0.1
2,687,072	-				-2.8
2,687,072	-				-1.2
2,687,094	-				-2.3
2,687,109	+				-0.3
2,687,156	+				-0.4
2,687,181	+				-0.7
2,687,181	+				-0.5
2,687,181	+				-1.8
2,687,181	+				+0.5
2,687,188	-				-0.3
2,687,188	-				+1.7
2,687,189	-				+0.5
2,687,193	-				-0.4
2,687,203	-				+0.0
2,687,208	-				-0.4
2,687,229	-				-1.2
2,687,317	+				+0.6
2,687,355	+				+1.5
2,687,382	+				-0.2