Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19910

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
2,065,901	-		PGA1_c19900	0.35	+0.3
2,065,901	-		PGA1_c19900	0.35	-1.0
2,065,985	+		PGA1_c19900	0.56	+1.4
2,066,009	+		PGA1_c19900	0.62	+1.6
2,066,028	+		PGA1_c19900	0.67	+1.6
2,066,028	+		PGA1_c19900	0.67	+2.0
2,066,036	-		PGA1_c19900	0.69	+1.0
2,066,149	+				-0.9
2,066,157	-				+0.1
2,066,157	-				-1.0
2,066,216	+				-1.3
2,066,216	+				+0.1
2,066,216	+				-0.1
2,066,216	+				-1.4
2,066,224	-				+1.5
2,066,224	-				+0.2
2,066,245	-				+0.1
2,066,273	-		PGA1_c19910	0.17	-1.5
2,066,294	-		PGA1_c19910	0.22	-0.5
2,066,403	+		PGA1_c19910	0.47	+0.1
2,066,453	-		PGA1_c19910	0.59	-0.5
2,066,566	+		PGA1_c19910	0.86	-0.4
2,066,614	+				-0.6
2,066,695	+				-0.5
2,066,785	+		PGA1_c19920	0.12	-0.6
2,066,801	-		PGA1_c19920	0.14	+0.3
2,066,817	-		PGA1_c19920	0.16	+1.5
2,066,885	+		PGA1_c19920	0.23	-0.9
2,066,961	-		PGA1_c19920	0.31	-0.7
2,067,007	+		PGA1_c19920	0.36	-0.1
2,067,007	+		PGA1_c19920	0.36	-0.5
2,067,015	-		PGA1_c19920	0.36	+0.1
2,067,049	+		PGA1_c19920	0.40	+0.9
2,067,053	+		PGA1_c19920	0.40	+1.0
2,067,095	-		PGA1_c19920	0.45	-0.5
2,067,106	-		PGA1_c19920	0.46	+1.2
2,067,109	+		PGA1_c19920	0.46	+0.9
2,067,186	-		PGA1_c19920	0.54	-1.0
2,067,186	-		PGA1_c19920	0.54	-1.2
2,067,265	-		PGA1_c19920	0.63	+0.5
2,067,321	+		PGA1_c19920	0.69	-0.5
2,067,376	-		PGA1_c19920	0.74	+0.5
2,067,446	-		PGA1_c19920	0.82	-0.6
2,067,446	-		PGA1_c19920	0.82	-0.2
2,067,446	-		PGA1_c19920	0.82	+1.8
2,067,508	+		PGA1_c19920	0.88	+1.0
2,067,554	-				-2.1
2,067,611	-				+0.8