Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17130

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,790,877	+		PGA1_c17120	0.64	-2.4
1,791,176	-		PGA1_c17120	0.78	-0.8
1,791,197	+		PGA1_c17120	0.79	+1.0
1,791,330	+		PGA1_c17120	0.85	+0.7
1,791,340	+		PGA1_c17120	0.85	-0.2
1,791,384	-		PGA1_c17120	0.87	-0.7
1,791,476	+				+0.2
1,791,524	+				-0.2
1,791,532	-				+2.0
1,791,644	+				-1.1
1,791,644	+				-1.2
1,791,644	+				-0.5
1,791,644	+				-0.3
1,791,644	+				+2.2
1,791,644	+				-1.2
1,791,644	+				+1.1
1,791,644	+				-0.5
1,791,644	+				-0.3
1,791,644	+				+1.4
1,791,644	+				-2.1
1,791,652	-				+0.4
1,791,652	-				-0.7
1,791,652	-				+1.0
1,791,652	-				-1.4
1,791,652	-				-0.6
1,791,652	-				-0.1
1,791,652	-				+1.0
1,791,770	+				-0.2
1,791,772	+				-0.6
1,791,817	-				+1.9
1,791,819	-				+1.5
1,791,842	-		PGA1_c17130	0.13	-0.9
1,791,844	+		PGA1_c17130	0.13	+2.7
1,791,849	-		PGA1_c17130	0.15	-0.1
1,791,907	-		PGA1_c17130	0.32	+0.0
1,791,920	+		PGA1_c17130	0.36	+1.7
1,791,938	+		PGA1_c17130	0.41	-1.7
1,791,960	+		PGA1_c17130	0.48	+2.6
1,791,970	+		PGA1_c17130	0.51	-1.8
1,792,000	+		PGA1_c17130	0.60	+0.8
1,792,023	+		PGA1_c17130	0.67	+1.2
1,792,036	+		PGA1_c17130	0.71	-0.4
1,792,049	-		PGA1_c17130	0.75	+0.6
1,792,144	-				-0.2
1,792,158	+				-0.3
1,792,158	+				-0.8
1,792,166	-				+0.4
1,792,166	-				-0.8
1,792,245	-		PGA1_c17140	0.12	+0.4
1,792,247	-		PGA1_c17140	0.13	-0.6
1,792,286	+		PGA1_c17140	0.20	+1.7
1,792,293	+		PGA1_c17140	0.21	+1.1
1,792,298	+		PGA1_c17140	0.22	-0.4
1,792,301	-		PGA1_c17140	0.23	+0.6
1,792,303	+		PGA1_c17140	0.23	-1.5
1,792,303	+		PGA1_c17140	0.23	+1.1
1,792,306	-		PGA1_c17140	0.24	-0.2
1,792,306	-		PGA1_c17140	0.24	-0.5
1,792,311	-		PGA1_c17140	0.25	+0.9
1,792,311	-		PGA1_c17140	0.25	-0.5
1,792,311	-		PGA1_c17140	0.25	+1.0
1,792,311	-		PGA1_c17140	0.25	-0.2
1,792,357	+		PGA1_c17140	0.34	-1.4
1,792,357	+		PGA1_c17140	0.34	+0.9
1,792,357	+		PGA1_c17140	0.34	-0.5
1,792,357	+		PGA1_c17140	0.34	+0.2
1,792,430	+		PGA1_c17140	0.47	-0.2
1,792,474	+		PGA1_c17140	0.56	+0.2
1,792,482	-		PGA1_c17140	0.57	-0.2
1,792,482	-		PGA1_c17140	0.57	+0.1
1,792,482	-		PGA1_c17140	0.57	-1.9
1,792,537	+		PGA1_c17140	0.67	-2.3
1,792,553	-		PGA1_c17140	0.70	-0.8
1,792,589	-		PGA1_c17140	0.77	-0.4
1,792,659	+				+0.1
1,792,659	+				+1.4
1,792,723	+				+1.2
1,792,723	+				+2.1
1,792,723	+				+0.4
1,792,723	+				+0.9
1,792,731	-				+1.3
1,792,772	+				-0.6
1,792,820	-		PGA1_c17160	0.18	+0.4
1,792,858	-		PGA1_c17160	0.34	-2.4
1,792,982	+		PGA1_c17160	0.86	+1.3
1,792,982	+		PGA1_c17160	0.86	-2.6
1,792,990	-				+0.6
1,793,028	+				+0.1
1,793,046	-		PGA1_c17170	0.11	-0.4
1,793,056	+		PGA1_c17170	0.16	+0.8