Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16240

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,684,887	+		PGA1_c16220	0.74	+0.6
1,684,915	+		PGA1_c16220	0.76	-0.9
1,684,923	-		PGA1_c16220	0.76	-0.1
1,684,964	-		PGA1_c16220	0.78	-1.0
1,684,964	-		PGA1_c16220	0.78	-1.6
1,685,044	+		PGA1_c16220	0.81	+1.6
1,685,088	+		PGA1_c16220	0.83	+2.7
1,685,123	-		PGA1_c16220	0.85	+0.4
1,685,128	-		PGA1_c16220	0.85	+0.8
1,685,146	-		PGA1_c16220	0.86	-0.2
1,685,146	-		PGA1_c16220	0.86	+0.1
1,685,146	-		PGA1_c16220	0.86	+1.9
1,685,149	+		PGA1_c16220	0.86	+1.0
1,685,149	+		PGA1_c16220	0.86	-1.2
1,685,160	+		PGA1_c16220	0.86	+2.0
1,685,199	+		PGA1_c16220	0.88	+1.0
1,685,226	+		PGA1_c16220	0.89	+0.3
1,685,244	+				+1.4
1,685,244	+				-0.0
1,685,259	-				+1.4
1,685,297	-				+0.4
1,685,299	-				+1.3
1,685,459	+				-1.1
1,685,464	+				-0.0
1,685,501	-				+0.4
1,685,501	-				-2.6
1,685,501	-				+1.5
1,685,503	+				-1.2
1,685,531	+		PGA1_c16230	0.18	+0.9
1,685,581	+		PGA1_c16230	0.35	-1.2
1,685,636	+		PGA1_c16230	0.54	+0.6
1,685,665	+		PGA1_c16230	0.64	+0.9
1,685,703	-		PGA1_c16230	0.77	-0.1
1,685,704	+		PGA1_c16230	0.77	+0.1
1,685,704	+		PGA1_c16230	0.77	-0.8
1,685,781	+				-1.2
1,685,825	+				+0.0
1,685,883	-				+1.1
1,685,891	+				-0.6
1,685,891	+				+1.1
1,685,891	+				+1.4
1,685,919	-				+0.1
1,685,919	-				+0.8
1,686,058	-		PGA1_c16240	0.18	-0.3
1,686,101	+		PGA1_c16240	0.22	-1.5
1,686,109	-		PGA1_c16240	0.23	-0.0
1,686,109	-		PGA1_c16240	0.23	-0.3
1,686,111	+		PGA1_c16240	0.23	-0.2
1,686,112	-		PGA1_c16240	0.23	-0.2
1,686,186	+		PGA1_c16240	0.30	+0.1
1,686,187	-		PGA1_c16240	0.30	+1.4
1,686,190	+		PGA1_c16240	0.30	+0.0
1,686,190	+		PGA1_c16240	0.30	+0.4
1,686,190	+		PGA1_c16240	0.30	-0.3
1,686,272	+		PGA1_c16240	0.38	-0.4
1,686,445	-		PGA1_c16240	0.53	+0.5
1,686,479	+		PGA1_c16240	0.56	-0.3
1,686,508	-		PGA1_c16240	0.59	+0.1
1,686,513	-		PGA1_c16240	0.59	-1.4
1,686,558	+		PGA1_c16240	0.63	-3.8
1,686,570	-		PGA1_c16240	0.65	+0.2
1,686,581	-		PGA1_c16240	0.66	-0.0
1,686,637	-		PGA1_c16240	0.71	-0.1
1,686,638	-		PGA1_c16240	0.71	+0.3
1,686,646	+		PGA1_c16240	0.71	-0.2
1,686,659	-		PGA1_c16240	0.73	-1.1
1,686,763	-		PGA1_c16240	0.82	-2.8
1,686,765	+		PGA1_c16240	0.82	+0.4
1,686,765	+		PGA1_c16240	0.82	-0.6
1,686,819	-		PGA1_c16240	0.87	+1.0
1,686,850	-				+0.3
1,686,905	+				+1.3
1,686,918	-				-1.4
1,687,001	-				-0.5
1,687,016	+				+1.9
1,687,055	-		PGA1_c16250	0.13	-3.1
1,687,176	+		PGA1_c16250	0.31	-0.2
1,687,176	+		PGA1_c16250	0.31	+0.8
1,687,181	+		PGA1_c16250	0.32	-0.3
1,687,184	-		PGA1_c16250	0.32	-0.6
1,687,198	+		PGA1_c16250	0.34	+0.7
1,687,206	-		PGA1_c16250	0.35	+1.5
1,687,256	-		PGA1_c16250	0.43	-0.8
1,687,298	-		PGA1_c16250	0.49	-0.4
1,687,319	+		PGA1_c16250	0.52	+0.2
1,687,356	+		PGA1_c16250	0.58	-1.2
1,687,395	-		PGA1_c16250	0.64	+1.5
1,687,441	+		PGA1_c16250	0.70	+0.6
1,687,562	-		PGA1_c16250	0.88	+0.7
1,687,563	+		PGA1_c16250	0.89	+2.1
1,687,563	+		PGA1_c16250	0.89	+0.4
1,687,563	+		PGA1_c16250	0.89	+1.9
1,687,571	-		PGA1_c16250	0.90	-0.2
1,687,571	-		PGA1_c16250	0.90	+0.4
1,687,583	+				-1.3
1,687,695	+				-0.2
1,687,717	+				-0.1
1,687,734	+				+0.3
1,687,734	+				-0.0
1,687,742	-				+1.5
1,687,742	-				+0.2
1,687,742	-				-3.4
1,687,754	+				+0.1
1,687,764	+				+1.1
1,687,767	-				-0.2
1,687,817	+				+0.4