Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15210

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,580,908	+		PGA1_c15200	0.61	-1.3
1,581,027	+		PGA1_c15200	0.67	+0.0
1,581,033	+		PGA1_c15200	0.67	+0.7
1,581,490	+		PGA1_c15200	0.89	-0.7
1,581,654	-				+1.0
1,581,732	-				-2.9
1,581,732	-				-2.2
1,581,852	+				-0.3
1,581,968	-				+0.7
1,582,024	+		PGA1_c15210	0.12	+3.3
1,582,024	+		PGA1_c15210	0.12	-0.6
1,582,032	-		PGA1_c15210	0.12	-0.0
1,582,039	+		PGA1_c15210	0.13	-0.6
1,582,054	-		PGA1_c15210	0.14	-1.3
1,582,083	+		PGA1_c15210	0.17	-0.5
1,582,083	+		PGA1_c15210	0.17	-0.6
1,582,114	+		PGA1_c15210	0.19	-0.6
1,582,141	-		PGA1_c15210	0.22	-0.6
1,582,159	+		PGA1_c15210	0.23	-1.7
1,582,168	+		PGA1_c15210	0.24	-0.8
1,582,168	+		PGA1_c15210	0.24	+0.7
1,582,186	-		PGA1_c15210	0.26	-1.2
1,582,186	-		PGA1_c15210	0.26	-1.8
1,582,197	+		PGA1_c15210	0.27	+0.4
1,582,266	-		PGA1_c15210	0.32	-1.0
1,582,275	+		PGA1_c15210	0.33	+0.2
1,582,275	+		PGA1_c15210	0.33	-0.1
1,582,275	+		PGA1_c15210	0.33	-0.5
1,582,275	+		PGA1_c15210	0.33	-0.6
1,582,275	+		PGA1_c15210	0.33	+1.1
1,582,275	+		PGA1_c15210	0.33	+0.8
1,582,275	+		PGA1_c15210	0.33	+0.3
1,582,283	-		PGA1_c15210	0.34	+0.4
1,582,283	-		PGA1_c15210	0.34	-0.2
1,582,285	+		PGA1_c15210	0.34	-1.6
1,582,362	-		PGA1_c15210	0.41	+0.8
1,582,400	+		PGA1_c15210	0.44	+0.2
1,582,412	+		PGA1_c15210	0.45	+0.2
1,582,487	-		PGA1_c15210	0.51	+0.6
1,582,659	-		PGA1_c15210	0.66	+2.0
1,582,686	+		PGA1_c15210	0.68	-1.6
1,582,797	-		PGA1_c15210	0.78	+0.3
1,582,801	+		PGA1_c15210	0.78	-0.5
1,582,801	+		PGA1_c15210	0.78	-2.9
1,582,801	+		PGA1_c15210	0.78	-0.7
1,582,809	-		PGA1_c15210	0.79	+0.6
1,582,809	-		PGA1_c15210	0.79	-0.0
1,582,844	+		PGA1_c15210	0.82	-1.1
1,582,844	+		PGA1_c15210	0.82	-0.6
1,582,844	+		PGA1_c15210	0.82	-0.7
1,582,852	-		PGA1_c15210	0.82	-1.6
1,582,852	-		PGA1_c15210	0.82	+0.8
1,582,896	+		PGA1_c15210	0.86	-0.4
1,582,911	-		PGA1_c15210	0.87	-0.1
1,582,997	+				+0.1
1,582,997	-				+1.6
1,583,018	+				-0.1
1,583,044	-				+0.2
1,583,059	+				+0.6
1,583,143	-				-0.7
1,583,143	-				-1.2
1,583,182	+				-0.2
1,583,187	+				+0.5
1,583,195	-				+0.4
1,583,197	+				+0.7
1,583,205	+				+1.4
1,583,205	+				-0.4
1,583,212	-				+0.8
1,583,212	-				-1.0
1,583,318	-				-2.8
1,583,340	+				-2.1
1,583,364	-				-3.3
1,583,374	-				-2.2
1,583,433	+				+0.1
1,583,445	+				-0.6
1,583,593	+		PGA1_c15220	0.18	-1.6
1,583,633	-		PGA1_c15220	0.21	-0.8
1,583,662	+		PGA1_c15220	0.23	+2.0
1,583,824	-		PGA1_c15220	0.34	-1.2
1,583,895	+		PGA1_c15220	0.39	-0.7
1,583,905	+		PGA1_c15220	0.40	-1.5