Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15150

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,576,014	+				+1.9
1,576,014	+				+0.7
1,576,022	-				-0.1
1,576,022	-				+0.1
1,576,055	+				-0.3
1,576,085	+				-0.8
1,576,093	-				+0.8
1,576,093	-				+0.4
1,576,103	-				+0.1
1,576,104	-				-2.1
1,576,109	+				-0.5
1,576,117	-				+0.8
1,576,117	-				+0.1
1,576,166	+		PGA1_c15150	0.14	+1.6
1,576,169	-		PGA1_c15150	0.16	-1.2
1,576,174	-		PGA1_c15150	0.17	+1.2
1,576,174	-		PGA1_c15150	0.17	+0.1
1,576,179	-		PGA1_c15150	0.19	-0.1
1,576,181	-		PGA1_c15150	0.20	+0.3
1,576,184	-		PGA1_c15150	0.21	+1.3
1,576,191	+		PGA1_c15150	0.24	+1.4
1,576,214	+		PGA1_c15150	0.32	+3.1
1,576,222	-		PGA1_c15150	0.35	+2.0
1,576,239	+		PGA1_c15150	0.41	+0.6
1,576,284	+		PGA1_c15150	0.58	-0.0
1,576,284	+		PGA1_c15150	0.58	+0.7
1,576,292	-		PGA1_c15150	0.61	-0.1
1,576,326	+		PGA1_c15150	0.74	-1.2
1,576,334	-		PGA1_c15150	0.77	+1.4
1,576,369	+		PGA1_c15150	0.90	+0.2
1,576,369	+		PGA1_c15150	0.90	-0.3
1,576,369	+		PGA1_c15150	0.90	+1.5
1,576,369	+		PGA1_c15150	0.90	+2.2
1,576,369	+		PGA1_c15150	0.90	+1.4
1,576,369	+		PGA1_c15150	0.90	-0.4
1,576,377	-				+0.2
1,576,377	-				+0.0
1,576,377	-				+0.2
1,576,377	-				+1.9
1,576,377	-				+0.4
1,576,387	-				-0.6
1,576,452	+				-1.4
1,576,459	+				+0.9
1,576,459	+				+0.6
1,576,460	-				+0.4
1,576,465	-				+0.4
1,576,465	-				+0.5
1,576,465	-				+0.6
1,576,467	-				-1.4
1,576,490	-				+0.2
1,576,525	-				+0.1
1,576,570	-				+0.9
1,576,581	+				+0.6
1,576,637	-				-0.4
1,576,684	+				+1.0
1,576,724	+				+0.2
1,576,732	-				+0.5
1,576,734	+				+0.2
1,576,763	-				+0.5
1,576,782	-				-1.3
1,576,975	-		PGA1_c15160	0.21	-1.1
1,577,003	+		PGA1_c15160	0.23	-0.1
1,577,070	+		PGA1_c15160	0.27	-2.4
1,577,070	+		PGA1_c15160	0.27	+0.0
1,577,078	-		PGA1_c15160	0.28	-0.9
1,577,078	-		PGA1_c15160	0.28	-1.9
1,577,129	+		PGA1_c15160	0.31	+0.1
1,577,142	-		PGA1_c15160	0.32	+0.8
1,577,230	+		PGA1_c15160	0.38	-0.8
1,577,230	+		PGA1_c15160	0.38	+0.2
1,577,230	+		PGA1_c15160	0.38	-2.3
1,577,230	+		PGA1_c15160	0.38	+0.5
1,577,238	-		PGA1_c15160	0.39	-1.0
1,577,238	-		PGA1_c15160	0.39	-0.6
1,577,238	-		PGA1_c15160	0.39	+1.0
1,577,238	-		PGA1_c15160	0.39	+0.7
1,577,238	-		PGA1_c15160	0.39	-0.3
1,577,238	-		PGA1_c15160	0.39	+0.8
1,577,238	-		PGA1_c15160	0.39	+0.6
1,577,288	+		PGA1_c15160	0.42	+0.9
1,577,394	-		PGA1_c15160	0.49	-0.1