Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11580

Experiment: marine broth pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth pH 6
1,196,459	+				-1.2
1,196,502	+				-0.9
1,196,525	+				-0.2
1,196,526	+				-0.4
1,196,596	-				+0.2
1,196,596	-				+0.3
1,196,597	-				-2.8
1,196,614	-				+0.2
1,196,616	+				+0.6
1,196,616	+				-0.9
1,196,624	-				+2.1
1,196,632	+				-1.2
1,196,679	+				-0.0
1,196,682	-				-0.9
1,196,682	-				-1.6
1,196,682	-				-1.0
1,196,934	-		PGA1_c11570	0.36	-1.0
1,196,992	+		PGA1_c11570	0.44	-0.2
1,197,050	+		PGA1_c11570	0.53	-1.8
1,197,072	+		PGA1_c11570	0.56	-0.8
1,197,080	-		PGA1_c11570	0.57	-2.1
1,197,161	+		PGA1_c11570	0.68	-0.7
1,197,161	+		PGA1_c11570	0.68	-0.7
1,197,161	+		PGA1_c11570	0.68	-0.0
1,197,161	+		PGA1_c11570	0.68	-0.0
1,197,187	+		PGA1_c11570	0.72	-1.4
1,197,212	-		PGA1_c11570	0.75	-0.1
1,197,282	+		PGA1_c11570	0.85	-1.0
1,197,290	-		PGA1_c11570	0.86	+0.0
1,197,300	-		PGA1_c11570	0.88	-1.0
1,197,322	+				-0.5
1,197,356	+				-1.0
1,197,356	+				-1.4
1,197,366	+				-3.4
1,197,397	-				-2.4
1,197,503	+		PGA1_c11580	0.10	-1.8
1,197,503	+		PGA1_c11580	0.10	-3.2
1,197,548	+		PGA1_c11580	0.16	-0.5
1,197,738	+		PGA1_c11580	0.40	+0.3
1,197,741	+		PGA1_c11580	0.41	-3.3
1,197,741	+		PGA1_c11580	0.41	-1.0
1,197,748	+		PGA1_c11580	0.41	-0.0
1,197,749	-		PGA1_c11580	0.42	+0.2
1,197,751	+		PGA1_c11580	0.42	-1.4
1,197,820	-		PGA1_c11580	0.51	-0.7
1,197,912	+		PGA1_c11580	0.62	-1.4
1,198,060	+		PGA1_c11580	0.81	-0.3
1,198,060	-		PGA1_c11580	0.81	-0.0
1,198,149	-				-0.3
1,198,149	-				-2.2
1,198,166	-				-0.5
1,198,194	+				-1.0
1,198,199	+				-1.4
1,198,277	-				-0.9
1,198,285	-				+0.4
1,198,340	+				+1.2
1,198,348	-				-1.0
1,198,348	-				+1.5
1,198,348	-				-2.6
1,198,365	-				-0.4
1,198,365	-				+1.0
1,198,369	+				+0.9
1,198,395	+				-0.6
1,198,417	+				-0.8
1,198,465	+				+1.1
1,198,506	+				+0.4
1,198,514	-				+1.1
1,198,565	+		PGA1_c11590	0.12	-1.2
1,198,588	-		PGA1_c11590	0.15	+0.2
1,198,588	-		PGA1_c11590	0.15	+1.3
1,198,652	-		PGA1_c11590	0.23	+1.1
1,198,700	+		PGA1_c11590	0.30	-1.2
1,198,723	+		PGA1_c11590	0.32	+1.6
1,198,757	+		PGA1_c11590	0.37	-0.7
1,198,758	+		PGA1_c11590	0.37	-0.6
1,198,766	-		PGA1_c11590	0.38	+0.3
1,198,877	-		PGA1_c11590	0.52	+1.5
1,198,981	+		PGA1_c11590	0.65	+1.2
1,199,024	+		PGA1_c11590	0.71	+1.7
1,199,033	+		PGA1_c11590	0.72	-1.2
1,199,046	-		PGA1_c11590	0.74	+1.6
1,199,060	+		PGA1_c11590	0.75	+0.6
1,199,068	-		PGA1_c11590	0.76	+0.0
1,199,070	+		PGA1_c11590	0.77	-0.2
1,199,070	+		PGA1_c11590	0.77	-0.1
1,199,077	+		PGA1_c11590	0.77	-1.7
1,199,080	-		PGA1_c11590	0.78	-1.1
1,199,112	-		PGA1_c11590	0.82	-1.0
1,199,194	-				+1.1