Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1076

Experiment: 15:15 LD cycle bioreactor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	15:15 LD cycle bioreactor
1,085,589	-				-0.6
1,085,589	-				-0.9
1,085,595	+				-0.7
1,085,603	-				+0.0
1,085,668	-				+0.4
1,085,682	+				+0.0
1,085,682	+				+0.6
1,085,682	+				+0.6
1,085,690	-				+0.1
1,085,690	-				-0.7
1,085,697	+				-1.0
1,085,705	-				-0.0
1,085,728	+		Synpcc7942_1075	0.11	-0.6
1,085,747	+		Synpcc7942_1075	0.13	+0.9
1,085,753	+		Synpcc7942_1075	0.14	-1.1
1,085,753	+		Synpcc7942_1075	0.14	+0.6
1,085,753	+		Synpcc7942_1075	0.14	-0.7
1,085,753	+		Synpcc7942_1075	0.14	+1.0
1,085,753	+		Synpcc7942_1075	0.14	-1.0
1,085,753	+		Synpcc7942_1075	0.14	-0.2
1,085,753	+		Synpcc7942_1075	0.14	-1.0
1,085,753	+		Synpcc7942_1075	0.14	-0.7
1,085,753	+		Synpcc7942_1075	0.14	-0.2
1,085,753	+		Synpcc7942_1075	0.14	+0.0
1,085,753	+		Synpcc7942_1075	0.14	-0.4
1,085,755	-		Synpcc7942_1075	0.14	+1.6
1,085,755	-		Synpcc7942_1075	0.14	-1.7
1,085,761	-		Synpcc7942_1075	0.15	+1.6
1,085,761	-		Synpcc7942_1075	0.15	+0.9
1,085,761	-		Synpcc7942_1075	0.15	-0.7
1,085,761	-		Synpcc7942_1075	0.15	+0.3
1,085,761	-		Synpcc7942_1075	0.15	-1.0
1,085,761	-		Synpcc7942_1075	0.15	+1.6
1,085,761	-		Synpcc7942_1075	0.15	-1.3
1,085,761	-		Synpcc7942_1075	0.15	-0.3
1,085,761	-		Synpcc7942_1075	0.15	-1.0
1,085,761	-		Synpcc7942_1075	0.15	-1.2
1,085,763	+		Synpcc7942_1075	0.15	-1.4
1,085,771	-		Synpcc7942_1075	0.16	-1.4
1,085,778	-		Synpcc7942_1075	0.17	-0.7
1,085,822	+		Synpcc7942_1075	0.22	-0.4
1,085,822	+		Synpcc7942_1075	0.22	+2.2
1,085,823	+		Synpcc7942_1075	0.23	+0.3
1,085,823	+		Synpcc7942_1075	0.23	+1.6
1,085,823	+		Synpcc7942_1075	0.23	+0.8
1,085,823	+		Synpcc7942_1075	0.23	+0.5
1,085,835	+		Synpcc7942_1075	0.24	-0.4
1,085,840	+		Synpcc7942_1075	0.25	+1.2
1,085,848	-		Synpcc7942_1075	0.26	-0.4
1,085,848	-		Synpcc7942_1075	0.26	+0.1
1,085,861	+		Synpcc7942_1075	0.27	-1.0
1,085,862	+		Synpcc7942_1075	0.28	+0.9
1,085,869	-				+0.0
1,085,870	-		Synpcc7942_1075	0.29	-1.5
1,085,871	+		Synpcc7942_1075	0.29	+0.2
1,085,871	+		Synpcc7942_1075	0.29	-0.1
1,085,881	+		Synpcc7942_1075	0.30	-0.9
1,085,904	-		Synpcc7942_1075	0.33	-0.3
1,085,915	-		Synpcc7942_1075	0.34	+0.6
1,085,966	+		Synpcc7942_1075	0.41	+1.0
1,085,974	-		Synpcc7942_1075	0.42	-0.9
1,086,011	-		Synpcc7942_1075	0.46	+0.5
1,086,060	+				-2.3
1,086,060	+		Synpcc7942_1075	0.53	+1.3
1,086,080	+		Synpcc7942_1075	0.55	+1.6
1,086,080	+		Synpcc7942_1075	0.55	-0.2
1,086,080	+		Synpcc7942_1075	0.55	+0.0
1,086,080	+		Synpcc7942_1075	0.55	+0.0
1,086,080	+		Synpcc7942_1075	0.55	-0.2
1,086,116	+		Synpcc7942_1075	0.60	+0.4
1,086,125	-		Synpcc7942_1075	0.61	+0.6
1,086,164	+		Synpcc7942_1075	0.66	+0.1
1,086,172	-		Synpcc7942_1075	0.67	-1.0
1,086,206	-		Synpcc7942_1075	0.71	+0.6
1,086,228	-		Synpcc7942_1075	0.74	-1.4
1,086,238	+		Synpcc7942_1075	0.75	+1.6
1,086,243	+		Synpcc7942_1075	0.76	-1.9
1,086,253	+		Synpcc7942_1075	0.77	+0.0
1,086,253	+		Synpcc7942_1075	0.77	+0.0
1,086,253	+		Synpcc7942_1075	0.77	-0.1
1,086,253	+		Synpcc7942_1075	0.77	-2.0
1,086,253	+		Synpcc7942_1075	0.77	-0.2
1,086,253	+		Synpcc7942_1075	0.77	+1.6
1,086,253	+		Synpcc7942_1075	0.77	+0.6
1,086,261	-		Synpcc7942_1075	0.78	+0.7
1,086,261	-		Synpcc7942_1075	0.78	-0.5
1,086,261	-		Synpcc7942_1075	0.78	-0.0
1,086,261	-		Synpcc7942_1075	0.78	-2.8
1,086,261	-		Synpcc7942_1075	0.78	-0.4
1,086,261	-		Synpcc7942_1075	0.78	-0.6
1,086,261	-		Synpcc7942_1075	0.78	-0.7
1,086,261	-		Synpcc7942_1075	0.78	+1.0
1,086,266	+		Synpcc7942_1075	0.79	+0.0
1,086,266	-		Synpcc7942_1075	0.79	+0.8
1,086,268	+		Synpcc7942_1075	0.79	-0.7
1,086,291	-		Synpcc7942_1075	0.82	-1.1
1,086,310	-		Synpcc7942_1075	0.84	-0.0
1,086,335	+		Synpcc7942_1075	0.87	+0.2
1,086,335	+		Synpcc7942_1075	0.87	-0.1
1,086,339	+		Synpcc7942_1075	0.88	+2.6
1,086,349	+		Synpcc7942_1075	0.89	-1.2
1,086,365	+				-0.4
1,086,403	+				+0.6
1,086,427	+				+0.3
1,086,435	-				+0.0
1,086,435	-				+1.2
1,086,447	+				-0.7
1,086,462	-				+1.1
1,086,479	-				+0.1
1,086,556	-				+0.2
1,086,574	+				-0.3
1,086,605	+				+0.9
1,086,605	+				+0.9
1,086,615	-				-1.3
1,086,686	-		Synpcc7942_1076	0.25	+0.4
1,086,699	-		Synpcc7942_1076	0.28	-1.8
1,086,713	+		Synpcc7942_1076	0.32	+0.6
1,086,721	-		Synpcc7942_1076	0.34	+1.6
1,086,859	-		Synpcc7942_1076	0.67	+0.0
1,086,912	-		Synpcc7942_1076	0.79	+0.6
1,086,939	+		Synpcc7942_1076	0.86	+0.6
1,086,947	-		Synpcc7942_1076	0.88	-0.8
1,086,947	-		Synpcc7942_1076	0.88	-1.5
1,086,947	-		Synpcc7942_1076	0.88	-0.7
1,086,991	+				+1.6
1,087,101	+				-1.4
1,087,108	+				-1.0
1,087,111	-				-0.3
1,087,114	-				+0.7
1,087,125	+				-0.4
1,087,132	+				-1.5
1,087,133	-				-0.0
1,087,176	+				+0.0
1,087,176	+				+2.6
1,087,184	-				+0.0
1,087,184	-				+0.6
1,087,184	-				-1.0
1,087,184	-				-0.4
1,087,184	-				+0.0
1,087,184	-				-0.9
1,087,185	-				-0.4
1,087,185	-				+0.1
1,087,198	+				+1.0
1,087,203	+				-0.9
1,087,203	+				+0.8
1,087,203	+				+0.8
1,087,203	+				-0.4
1,087,206	-				+0.9
1,087,208	-				-1.5
1,087,210	+				-1.0
1,087,210	+				-0.9
1,087,210	+				-0.7
1,087,210	+				-1.0
1,087,210	+				+0.0
1,087,211	-				+0.2
1,087,211	-				-0.1
1,087,211	-				+0.6
1,087,211	-				-0.4
1,087,213	-				+0.1
1,087,218	-				+0.0
1,087,218	-				+0.0
1,087,218	-				+0.0
1,087,218	-				-0.4
1,087,218	-				-0.2
1,087,218	-				+0.1
1,087,218	-				-0.5
1,087,218	-				+0.6
1,087,234	+				+0.2
1,087,240	+				-0.6
1,087,306	-				-0.7
1,087,329	-				-0.8
1,087,350	+				-0.4
1,087,358	-				-0.5
1,087,388	+		Synpcc7942_1077	0.20	-2.0
1,087,389	+		Synpcc7942_1077	0.20	-0.1
1,087,402	-		Synpcc7942_1077	0.24	-1.0
1,087,402	-		Synpcc7942_1077	0.24	-0.7
1,087,402	-		Synpcc7942_1077	0.24	+0.3
1,087,404	+		Synpcc7942_1077	0.25	-0.1
1,087,430	-		Synpcc7942_1077	0.33	+0.6
1,087,436	+		Synpcc7942_1077	0.35	+2.6
1,087,444	-		Synpcc7942_1077	0.38	+0.1
1,087,444	-		Synpcc7942_1077	0.38	+0.9
1,087,444	-		Synpcc7942_1077	0.38	+1.1
1,087,444	-		Synpcc7942_1077	0.38	+1.6
1,087,461	+		Synpcc7942_1077	0.43	-0.6
1,087,470	-		Synpcc7942_1077	0.46	+1.0
1,087,473	+		Synpcc7942_1077	0.47	+0.2
1,087,502	-		Synpcc7942_1077	0.56	-2.2
1,087,514	+		Synpcc7942_1077	0.60	-0.1
1,087,537	+		Synpcc7942_1077	0.67	-0.9
1,087,637	+				-1.0
1,087,645	-				+0.5
1,087,659	+				+0.0
1,087,667	-				-0.8
1,087,699	+				-0.5
1,087,704	+				-0.2
1,087,712	-				+0.6
1,087,737	+				+1.0
1,087,737	+				-0.6
1,087,737	+				+0.8
1,087,737	+				+0.3
1,087,737	+				-0.2
1,087,745	-				-0.6
1,087,745	-				+1.2
1,087,745	-				+0.4
1,087,760	+				-1.1
1,087,815	+				-0.0
1,087,823	-				+0.2
1,087,825	+				-0.9
1,087,825	+				+2.1
1,087,825	+				+1.3
1,087,825	+				+0.4
1,087,833	-				+0.9
1,087,833	-				+0.3
1,087,833	-				-0.7
1,087,833	-				-0.8
1,087,853	+				-0.4
1,087,859	+				-1.4
1,087,869	-				-0.5
1,087,883	-		Synpcc7942_1078	0.11	+0.6
1,087,893	+		Synpcc7942_1078	0.12	+1.3
1,087,901	-		Synpcc7942_1078	0.13	-1.0
1,087,901	-		Synpcc7942_1078	0.13	+1.1
1,087,905	+		Synpcc7942_1078	0.14	+0.6
1,087,905	+		Synpcc7942_1078	0.14	-0.1
1,087,905	+		Synpcc7942_1078	0.14	+0.6
1,087,905	+		Synpcc7942_1078	0.14	+0.0
1,087,905	+		Synpcc7942_1078	0.14	+2.6
1,087,905	+		Synpcc7942_1078	0.14	+0.0
1,087,905	+		Synpcc7942_1078	0.14	+0.9
1,087,905	+		Synpcc7942_1078	0.14	+0.5
1,087,905	+		Synpcc7942_1078	0.14	-0.4
1,087,905	+		Synpcc7942_1078	0.14	-0.4
1,087,905	+		Synpcc7942_1078	0.14	+1.2
1,087,905	+		Synpcc7942_1078	0.14	-1.9
1,087,905	+		Synpcc7942_1078	0.14	-0.2
1,087,913	-		Synpcc7942_1078	0.15	+0.3
1,087,913	-		Synpcc7942_1078	0.15	-0.6
1,087,913	-		Synpcc7942_1078	0.15	+0.1
1,087,913	-		Synpcc7942_1078	0.15	-0.7
1,087,913	-		Synpcc7942_1078	0.15	-0.1