Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0866

Experiment: 15:15 LD cycle bioreactor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	15:15 LD cycle bioreactor
867,769	+				+1.7
867,769	+				+1.7
867,917	+				-0.0
867,925	-				-0.6
867,925	-				-1.1
867,926	+				-0.9
867,934	-				-0.1
867,963	-				-1.6
868,029	+				+0.5
868,029	+				+1.7
868,049	+		Synpcc7942_0865	0.13	-0.7
868,068	+		Synpcc7942_0865	0.17	-0.6
868,107	+		Synpcc7942_0865	0.25	+0.7
868,209	-		Synpcc7942_0865	0.45	+2.7
868,270	+		Synpcc7942_0865	0.58	+0.7
868,275	+		Synpcc7942_0865	0.59	-1.2
868,289	+		Synpcc7942_0865	0.62	-1.1
868,290	-		Synpcc7942_0865	0.62	-1.5
868,294	+		Synpcc7942_0865	0.63	+1.1
868,297	-		Synpcc7942_0865	0.63	+0.1
868,314	-		Synpcc7942_0865	0.67	-0.5
868,325	-		Synpcc7942_0865	0.69	-0.3
868,339	+		Synpcc7942_0865	0.72	-0.7
868,339	+		Synpcc7942_0865	0.72	+0.1
868,339	+		Synpcc7942_0865	0.72	-2.3
868,339	+		Synpcc7942_0865	0.72	+0.2
868,339	+		Synpcc7942_0865	0.72	-0.7
868,339	+		Synpcc7942_0865	0.72	-0.9
868,347	-		Synpcc7942_0865	0.73	-0.6
868,347	-		Synpcc7942_0865	0.73	-0.5
868,347	-		Synpcc7942_0865	0.73	-0.8
868,347	-		Synpcc7942_0865	0.73	-1.0
868,381	+		Synpcc7942_0865	0.80	-0.7
868,386	+		Synpcc7942_0865	0.81	+0.8
868,386	+		Synpcc7942_0865	0.81	+0.1
868,386	+		Synpcc7942_0865	0.81	+0.9
868,393	+		Synpcc7942_0865	0.83	-1.6
868,394	-		Synpcc7942_0865	0.83	+1.0
868,394	-		Synpcc7942_0865	0.83	-0.8
868,394	-		Synpcc7942_0865	0.83	-0.1
868,394	-		Synpcc7942_0865	0.83	-0.8
868,394	-		Synpcc7942_0865	0.83	-0.6
868,398	+				+1.7
868,401	-		Synpcc7942_0865	0.84	-0.2
868,405	-		Synpcc7942_0865	0.85	+1.8
868,433	+				+0.1
868,451	+				-0.6
868,492	+				-0.5
868,501	+				-1.3
868,501	+				-0.7
868,501	+				+2.7
868,501	+				-0.8
868,501	+				+1.1
868,501	+				+0.0
868,501	+				-0.2
868,509	-				+0.3
868,509	-				+0.3
868,512	+				+0.1
868,512	+				-0.3
868,514	-				-0.9
868,520	-				+1.7
868,520	-				+0.1
868,522	+				-0.6
868,522	+				+0.7
868,522	+				-1.6
868,530	-				+0.3
868,530	-				+0.0
868,530	-				-1.1
868,530	-				+0.4
868,530	-				+0.0
868,595	-				+0.7
868,617	-		Synpcc7942_0866	0.13	-0.9
868,617	-		Synpcc7942_0866	0.13	+0.9
868,617	-				+0.7
868,677	-		Synpcc7942_0866	0.24	+0.7
868,677	-		Synpcc7942_0866	0.24	+0.7
868,738	+		Synpcc7942_0866	0.34	+1.7
868,744	+		Synpcc7942_0866	0.35	+0.1
868,749	-		Synpcc7942_0866	0.36	+1.7
868,754	-		Synpcc7942_0866	0.37	+0.7
868,754	-		Synpcc7942_0866	0.37	+0.7
868,773	-		Synpcc7942_0866	0.40	+1.7
868,854	+		Synpcc7942_0866	0.54	-0.8
868,874	+		Synpcc7942_0866	0.57	-0.9
868,879	+		Synpcc7942_0866	0.58	+1.7
868,884	+		Synpcc7942_0866	0.59	-1.1
868,884	+		Synpcc7942_0866	0.59	-2.3
868,892	-		Synpcc7942_0866	0.60	+0.1
868,892	-		Synpcc7942_0866	0.60	-0.2
868,927	-		Synpcc7942_0866	0.66	+1.7
868,930	+		Synpcc7942_0866	0.67	+1.7
868,930	+		Synpcc7942_0866	0.67	-1.2
868,930	+		Synpcc7942_0866	0.67	+2.2
868,930	+		Synpcc7942_0866	0.67	+0.1
868,939	-		Synpcc7942_0866	0.69	-0.3
868,958	+		Synpcc7942_0866	0.72	-1.0
868,977	+		Synpcc7942_0866	0.75	-0.5
868,985	-		Synpcc7942_0866	0.76	+0.7
868,991	-		Synpcc7942_0866	0.77	-0.6
868,993	+		Synpcc7942_0866	0.78	+1.7
869,009	+		Synpcc7942_0866	0.81	-0.3
869,012	+		Synpcc7942_0866	0.81	-1.8
869,012	+		Synpcc7942_0866	0.81	+0.3
869,017	-		Synpcc7942_0866	0.82	-0.8
869,017	-		Synpcc7942_0866	0.82	+1.7
869,017	-		Synpcc7942_0866	0.82	-1.0
869,020	-		Synpcc7942_0866	0.82	-2.2
869,027	-		Synpcc7942_0866	0.84	-1.2
869,061	-		Synpcc7942_0866	0.90	-1.7
869,090	+				-0.5
869,134	+				+2.1
869,142	-				-0.6
869,166	+				+0.2
869,178	+				-1.6
869,187	+				+0.7
869,189	+				+1.1
869,195	-				-0.1
869,201	+				-1.0
869,204	-		Synpcc7942_0867	0.10	-0.8
869,209	-		Synpcc7942_0867	0.12	+0.1
869,220	+		Synpcc7942_0867	0.15	-0.4
869,269	+		Synpcc7942_0867	0.30	-0.9
869,295	+		Synpcc7942_0867	0.38	-0.3
869,337	-		Synpcc7942_0867	0.50	+0.4
869,373	+		Synpcc7942_0867	0.61	+0.7
869,381	-		Synpcc7942_0867	0.63	+0.5
869,394	-		Synpcc7942_0867	0.67	-1.3
869,399	-		Synpcc7942_0867	0.68	-1.0
869,418	+		Synpcc7942_0867	0.74	-1.3
869,432	-		Synpcc7942_0867	0.78	-0.1
869,493	+				-0.9
869,493	+				-1.0
869,499	+				+0.5
869,501	-				-1.5
869,515	-				+0.1
869,524	+				+0.7
869,618	+				-1.0
869,623	+				-2.3
869,631	-				+0.3
869,656	+				-0.2
869,689	-		Synpcc7942_0868	0.11	-1.0
869,721	+		Synpcc7942_0868	0.12	-1.0
869,788	-		Synpcc7942_0868	0.16	+0.4
869,804	-		Synpcc7942_0868	0.17	-1.1
869,825	+		Synpcc7942_0868	0.18	+0.3
869,825	+		Synpcc7942_0868	0.18	+0.2
869,833	-		Synpcc7942_0868	0.19	-0.5
869,864	+		Synpcc7942_0868	0.21	+0.6
869,879	+		Synpcc7942_0868	0.21	-0.9
869,894	+		Synpcc7942_0868	0.22	+0.4
869,895	+		Synpcc7942_0868	0.22	-1.5
869,903	-		Synpcc7942_0868	0.23	+0.0
869,904	+		Synpcc7942_0868	0.23	-0.1
869,907	-		Synpcc7942_0868	0.23	-1.3
869,912	-		Synpcc7942_0868	0.23	-0.2
869,912	-		Synpcc7942_0868	0.23	-1.0
869,925	-		Synpcc7942_0868	0.24	-2.4
869,937	-		Synpcc7942_0868	0.25	-0.2
869,937	-		Synpcc7942_0868	0.25	+0.7
869,950	-		Synpcc7942_0868	0.25	+0.1
869,951	+		Synpcc7942_0868	0.26	+0.1
869,983	-		Synpcc7942_0868	0.27	-0.5
870,014	-		Synpcc7942_0868	0.29	-1.1
870,042	-		Synpcc7942_0868	0.31	+0.2
870,044	-		Synpcc7942_0868	0.31	+0.7
870,044	-		Synpcc7942_0868	0.31	+0.3
870,096	+		Synpcc7942_0868	0.34	-0.2
870,097	-		Synpcc7942_0868	0.34	+0.1
870,112	-		Synpcc7942_0868	0.35	+0.1