Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF26503 and DVU0243 are separated by 29 nucleotides DVU0243 and DVU0244 are separated by 59 nucleotides DVU0244 and DVU0245 are separated by 29 nucleotides
DORF26503: DORF26503 - no description, at 274,761 to 275,414
DORF26503
DVU0243: DVU0243 - lipoprotein, putative (TIGR), at 275,444 to 276,112
DVU0243
DVU0244: DVU0244 - hypothetical protein (TIGR), at 276,172 to 277,029
DVU0244
DVU0245: DVU0245 - protein phosphatase, putative (TIGR), at 277,059 to 278,168
DVU0245
Position (kb) 276
277
278 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 275.374 kb on + strand at 275.454 kb on + strand at 275.462 kb on - strand at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.573 kb on - strand, within DVU0243 at 275.592 kb on - strand, within DVU0243 at 275.592 kb on - strand, within DVU0243 at 275.594 kb on + strand, within DVU0243 at 275.645 kb on + strand, within DVU0243 at 275.647 kb on + strand, within DVU0243 at 275.655 kb on + strand, within DVU0243 at 275.694 kb on - strand, within DVU0243 at 275.710 kb on + strand, within DVU0243 at 275.718 kb on - strand, within DVU0243 at 275.723 kb on - strand, within DVU0243 at 275.731 kb on - strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.774 kb on - strand, within DVU0243 at 275.816 kb on - strand, within DVU0243 at 275.877 kb on + strand, within DVU0243 at 276.019 kb on + strand, within DVU0243 at 276.027 kb on - strand, within DVU0243 at 276.027 kb on - strand, within DVU0243 at 276.058 kb on - strand at 276.094 kb on + strand at 276.114 kb on + strand at 276.198 kb on + strand at 276.213 kb on + strand at 276.231 kb on - strand at 276.262 kb on + strand, within DVU0244 at 276.270 kb on - strand, within DVU0244 at 276.275 kb on - strand, within DVU0244 at 276.298 kb on + strand, within DVU0244 at 276.516 kb on - strand, within DVU0244 at 276.556 kb on - strand, within DVU0244 at 276.568 kb on - strand, within DVU0244 at 276.573 kb on - strand, within DVU0244 at 276.601 kb on - strand, within DVU0244 at 276.614 kb on - strand, within DVU0244 at 276.748 kb on + strand, within DVU0244 at 276.775 kb on + strand, within DVU0244 at 276.969 kb on + strand at 277.044 kb on - strand at 277.057 kb on + strand at 277.065 kb on - strand at 277.207 kb on - strand, within DVU0245 at 277.207 kb on - strand, within DVU0245 at 277.278 kb on + strand, within DVU0245 at 277.378 kb on - strand, within DVU0245 at 277.387 kb on + strand, within DVU0245 at 277.406 kb on + strand, within DVU0245 at 277.464 kb on - strand, within DVU0245 at 277.464 kb on - strand, within DVU0245 at 277.503 kb on + strand, within DVU0245 at 277.513 kb on - strand, within DVU0245 at 277.762 kb on + strand, within DVU0245 at 277.793 kb on + strand, within DVU0245 at 277.821 kb on + strand, within DVU0245 at 277.848 kb on + strand, within DVU0245 at 277.856 kb on - strand, within DVU0245 at 277.888 kb on - strand, within DVU0245 at 277.948 kb on + strand, within DVU0245 at 277.999 kb on - strand, within DVU0245 at 278.002 kb on + strand, within DVU0245
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 275,374 + -1.3 275,454 + +0.3 275,462 - +0.7 275,523 - DVU0243 0.12 -2.2 275,523 - DVU0243 0.12 -2.6 275,523 - DVU0243 0.12 -0.8 275,523 - DVU0243 0.12 +0.5 275,573 - DVU0243 0.19 -0.8 275,592 - DVU0243 0.22 -2.0 275,592 - DVU0243 0.22 -1.2 275,594 + DVU0243 0.22 -0.3 275,645 + DVU0243 0.30 -0.1 275,647 + DVU0243 0.30 -1.3 275,655 + DVU0243 0.32 -1.3 275,694 - DVU0243 0.37 -1.2 275,710 + DVU0243 0.40 -1.0 275,718 - DVU0243 0.41 -1.9 275,723 - DVU0243 0.42 -1.4 275,731 - DVU0243 0.43 -1.4 275,738 + DVU0243 0.44 +2.5 275,738 + DVU0243 0.44 +1.1 275,738 + DVU0243 0.44 -0.7 275,738 + DVU0243 0.44 +1.4 275,774 - DVU0243 0.49 +3.5 275,816 - DVU0243 0.56 +0.4 275,877 + DVU0243 0.65 -0.8 276,019 + DVU0243 0.86 -1.9 276,027 - DVU0243 0.87 -1.2 276,027 - DVU0243 0.87 -1.1 276,058 - +1.5 276,094 + -1.5 276,114 + +1.2 276,198 + +2.5 276,213 + -0.7 276,231 - -0.7 276,262 + DVU0244 0.10 +2.6 276,270 - DVU0244 0.11 -0.6 276,275 - DVU0244 0.12 -2.7 276,298 + DVU0244 0.15 -2.4 276,516 - DVU0244 0.40 -2.2 276,556 - DVU0244 0.45 -1.0 276,568 - DVU0244 0.46 -2.0 276,573 - DVU0244 0.47 +0.3 276,601 - DVU0244 0.50 -0.3 276,614 - DVU0244 0.52 +1.3 276,748 + DVU0244 0.67 -1.2 276,775 + DVU0244 0.70 -1.0 276,969 + -0.8 277,044 - +2.7 277,057 + +1.6 277,065 - -1.2 277,207 - DVU0245 0.13 +2.1 277,207 - DVU0245 0.13 +2.3 277,278 + DVU0245 0.20 +2.7 277,378 - DVU0245 0.29 +2.1 277,387 + DVU0245 0.30 +2.4 277,406 + DVU0245 0.31 +0.6 277,464 - DVU0245 0.36 +2.0 277,464 - DVU0245 0.36 +0.1 277,503 + DVU0245 0.40 +3.5 277,513 - DVU0245 0.41 +3.2 277,762 + DVU0245 0.63 +1.5 277,793 + DVU0245 0.66 +1.4 277,821 + DVU0245 0.69 +1.5 277,848 + DVU0245 0.71 +2.2 277,856 - DVU0245 0.72 +2.6 277,888 - DVU0245 0.75 +2.0 277,948 + DVU0245 0.80 +3.0 277,999 - DVU0245 0.85 +0.4 278,002 + DVU0245 0.85 +1.3
Or see this region's nucleotide sequence