Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2716 and DVU2717 are separated by 78 nucleotides DVU2717 and DVU2719 are separated by 135 nucleotides DVU2719 and DVU2720 are separated by 197 nucleotides
DVU2716: DVU2716 - tail sheath protein, putative (TIGR), at 2,820,522 to 2,821,943
DVU2716
DVU2717: DVU2717 - hypothetical protein (TIGR), at 2,822,022 to 2,822,849
DVU2717
DVU2719: DVU2719 - conserved hypothetical protein (TIGR), at 2,822,985 to 2,823,359
DVU2719
DVU2720: DVU2720 - hypothetical protein (TIGR), at 2,823,557 to 2,823,886
DVU2720
Position (kb)
2822
2823 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2821.088 kb on - strand, within DVU2716 at 2821.090 kb on - strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.097 kb on + strand, within DVU2716 at 2821.105 kb on + strand, within DVU2716 at 2821.232 kb on - strand, within DVU2716 at 2821.262 kb on + strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.272 kb on - strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.287 kb on + strand, within DVU2716 at 2821.329 kb on - strand, within DVU2716 at 2821.329 kb on - strand, within DVU2716 at 2821.340 kb on + strand, within DVU2716 at 2821.358 kb on - strand, within DVU2716 at 2821.435 kb on + strand, within DVU2716 at 2821.477 kb on + strand, within DVU2716 at 2821.538 kb on - strand, within DVU2716 at 2821.596 kb on + strand, within DVU2716 at 2821.610 kb on - strand, within DVU2716 at 2821.744 kb on + strand, within DVU2716 at 2821.776 kb on + strand, within DVU2716 at 2821.786 kb on - strand, within DVU2716 at 2821.810 kb on - strand at 2821.859 kb on - strand at 2821.911 kb on - strand at 2822.119 kb on - strand, within DVU2717 at 2822.126 kb on - strand, within DVU2717 at 2822.334 kb on - strand, within DVU2717 at 2822.970 kb on + strand at 2823.049 kb on + strand, within DVU2719 at 2823.070 kb on + strand, within DVU2719 at 2823.109 kb on - strand, within DVU2719 at 2823.115 kb on - strand, within DVU2719 at 2823.152 kb on + strand, within DVU2719 at 2823.208 kb on + strand, within DVU2719 at 2823.216 kb on - strand, within DVU2719 at 2823.231 kb on + strand, within DVU2719 at 2823.288 kb on + strand, within DVU2719 at 2823.357 kb on - strand at 2823.403 kb on + strand at 2823.436 kb on + strand at 2823.485 kb on + strand at 2823.506 kb on - strand at 2823.543 kb on + strand at 2823.627 kb on - strand, within DVU2720 at 2823.629 kb on - strand, within DVU2720 at 2823.632 kb on - strand, within DVU2720 at 2823.662 kb on - strand, within DVU2720 at 2823.843 kb on - strand, within DVU2720
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 2,821,088 - DVU2716 0.40 +1.0 2,821,090 - DVU2716 0.40 -1.5 2,821,097 + DVU2716 0.40 -1.2 2,821,097 + DVU2716 0.40 +1.5 2,821,097 + DVU2716 0.40 -3.0 2,821,097 + DVU2716 0.40 +0.2 2,821,105 + DVU2716 0.41 -0.7 2,821,232 - DVU2716 0.50 -2.2 2,821,262 + DVU2716 0.52 -1.0 2,821,272 - DVU2716 0.53 +0.9 2,821,272 - DVU2716 0.53 -1.7 2,821,272 - DVU2716 0.53 +1.9 2,821,287 + DVU2716 0.54 +0.0 2,821,287 + DVU2716 0.54 -1.0 2,821,287 + DVU2716 0.54 -1.1 2,821,329 - DVU2716 0.57 +1.9 2,821,329 - DVU2716 0.57 +0.8 2,821,340 + DVU2716 0.58 +0.0 2,821,358 - DVU2716 0.59 +3.6 2,821,435 + DVU2716 0.64 -0.7 2,821,477 + DVU2716 0.67 -1.2 2,821,538 - DVU2716 0.71 -0.5 2,821,596 + DVU2716 0.76 -1.0 2,821,610 - DVU2716 0.77 +2.2 2,821,744 + DVU2716 0.86 +1.8 2,821,776 + DVU2716 0.88 -0.7 2,821,786 - DVU2716 0.89 -1.3 2,821,810 - -0.2 2,821,859 - +1.1 2,821,911 - +0.8 2,822,119 - DVU2717 0.12 -1.0 2,822,126 - DVU2717 0.13 -0.9 2,822,334 - DVU2717 0.38 -3.1 2,822,970 + +1.0 2,823,049 + DVU2719 0.17 -1.6 2,823,070 + DVU2719 0.23 +2.9 2,823,109 - DVU2719 0.33 +0.0 2,823,115 - DVU2719 0.35 -0.6 2,823,152 + DVU2719 0.45 +2.9 2,823,208 + DVU2719 0.59 +2.6 2,823,216 - DVU2719 0.62 +0.3 2,823,231 + DVU2719 0.66 -1.7 2,823,288 + DVU2719 0.81 +0.1 2,823,357 - +1.3 2,823,403 + +1.3 2,823,436 + -1.1 2,823,485 + -0.8 2,823,506 - +0.5 2,823,543 + +1.1 2,823,627 - DVU2720 0.21 +1.8 2,823,629 - DVU2720 0.22 -2.3 2,823,632 - DVU2720 0.23 -0.4 2,823,662 - DVU2720 0.32 -0.4 2,823,843 - DVU2720 0.87 -0.5
Or see this region's nucleotide sequence