Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0818 and isf-1 are separated by 313 nucleotides isf-1 and DVU0821 are separated by 403 nucleotides
DVU0818: DVU0818 - conserved domain protein (TIGR), at 906,828 to 908,576
DVU0818
DVU0819: isf-1 - FMN reductase, NADPH-dependent (TIGR), at 908,890 to 909,507
isf-1
DVU0821: DVU0821 - conserved hypothetical protein (TIGR), at 909,911 to 910,510
DVU0821
Position (kb) 908
909
910 Strain fitness (log2 ratio) -2
-1
0
1
2 at 907.999 kb on + strand, within DVU0818 at 908.097 kb on + strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.105 kb on - strand, within DVU0818 at 908.135 kb on - strand, within DVU0818 at 908.146 kb on + strand, within DVU0818 at 908.271 kb on + strand, within DVU0818 at 908.400 kb on - strand, within DVU0818 at 908.439 kb on + strand at 908.572 kb on + strand at 908.596 kb on - strand at 908.596 kb on - strand at 908.703 kb on + strand at 908.706 kb on - strand at 908.895 kb on - strand at 908.945 kb on + strand at 908.947 kb on - strand at 908.966 kb on + strand, within isf-1 at 909.033 kb on - strand, within isf-1 at 909.103 kb on + strand, within isf-1 at 909.215 kb on + strand, within isf-1 at 909.215 kb on + strand, within isf-1 at 909.223 kb on - strand, within isf-1 at 909.312 kb on - strand, within isf-1 at 909.378 kb on - strand, within isf-1 at 909.530 kb on - strand at 909.569 kb on + strand at 909.623 kb on - strand at 909.701 kb on + strand at 909.723 kb on + strand at 909.731 kb on - strand at 909.731 kb on - strand at 909.800 kb on - strand at 909.859 kb on - strand at 909.939 kb on + strand at 909.942 kb on - strand at 909.947 kb on - strand at 910.143 kb on + strand, within DVU0821 at 910.151 kb on - strand, within DVU0821 at 910.187 kb on - strand, within DVU0821
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 907,999 + DVU0818 0.67 +1.6 908,097 + DVU0818 0.73 -0.8 908,105 - DVU0818 0.73 +0.7 908,105 - DVU0818 0.73 -1.0 908,105 - DVU0818 0.73 -1.9 908,135 - DVU0818 0.75 -1.4 908,146 + DVU0818 0.75 -1.5 908,271 + DVU0818 0.83 -0.7 908,400 - DVU0818 0.90 +1.0 908,439 + -2.0 908,572 + -0.9 908,596 - -0.0 908,596 - -1.3 908,703 + -0.1 908,706 - -1.0 908,895 - -1.2 908,945 + +0.4 908,947 - +2.0 908,966 + isf-1 DVU0819 0.12 -1.5 909,033 - isf-1 DVU0819 0.23 -0.9 909,103 + isf-1 DVU0819 0.34 -1.7 909,215 + isf-1 DVU0819 0.53 -0.5 909,215 + isf-1 DVU0819 0.53 -1.4 909,223 - isf-1 DVU0819 0.54 +1.7 909,312 - isf-1 DVU0819 0.68 -1.1 909,378 - isf-1 DVU0819 0.79 -1.8 909,530 - -1.5 909,569 + -1.3 909,623 - -2.2 909,701 + -1.4 909,723 + +0.6 909,731 - -1.0 909,731 - +1.6 909,800 - -1.3 909,859 - -1.4 909,939 + -1.4 909,942 - +0.4 909,947 - -0.4 910,143 + DVU0821 0.39 +0.8 910,151 - DVU0821 0.40 -0.9 910,187 - DVU0821 0.46 -0.5
Or see this region's nucleotide sequence