Experiment: MoLS4 with L-Cysteine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0743 and DVU0744 overlap by 1 nucleotides DVU0744 and DVU0745 are separated by 232 nucleotides
DVU0743: DVU0743 - sensory box histidine kinase (TIGR), at 830,471 to 832,468
DVU0743
DVU0744: DVU0744 - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 832,468 to 834,177
DVU0744
DVU0745: DVU0745 - ABC transporter, periplasmic substrate-binding protein (TIGR), at 834,410 to 835,228
DVU0745
Position (kb) 832
833
834
835 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 831.598 kb on - strand, within DVU0743 at 831.641 kb on - strand, within DVU0743 at 831.656 kb on - strand, within DVU0743 at 831.727 kb on + strand, within DVU0743 at 831.815 kb on + strand, within DVU0743 at 831.858 kb on + strand, within DVU0743 at 831.937 kb on - strand, within DVU0743 at 831.937 kb on - strand, within DVU0743 at 831.965 kb on + strand, within DVU0743 at 831.973 kb on - strand, within DVU0743 at 831.974 kb on - strand, within DVU0743 at 832.007 kb on + strand, within DVU0743 at 832.030 kb on - strand, within DVU0743 at 832.030 kb on - strand, within DVU0743 at 832.065 kb on - strand, within DVU0743 at 832.065 kb on - strand, within DVU0743 at 832.157 kb on + strand, within DVU0743 at 832.162 kb on + strand, within DVU0743 at 832.162 kb on + strand, within DVU0743 at 832.167 kb on + strand, within DVU0743 at 832.167 kb on + strand, within DVU0743 at 832.175 kb on - strand, within DVU0743 at 832.298 kb on - strand at 832.347 kb on - strand at 832.348 kb on + strand at 832.390 kb on - strand at 832.390 kb on - strand at 832.390 kb on - strand at 832.400 kb on - strand at 832.438 kb on + strand at 832.444 kb on - strand at 832.634 kb on + strand at 832.651 kb on + strand, within DVU0744 at 832.687 kb on - strand, within DVU0744 at 832.696 kb on - strand, within DVU0744 at 832.767 kb on + strand, within DVU0744 at 832.789 kb on + strand, within DVU0744 at 832.832 kb on - strand, within DVU0744 at 832.890 kb on - strand, within DVU0744 at 832.999 kb on + strand, within DVU0744 at 833.166 kb on - strand, within DVU0744 at 833.269 kb on + strand, within DVU0744 at 833.277 kb on + strand, within DVU0744 at 833.340 kb on + strand, within DVU0744 at 833.404 kb on - strand, within DVU0744 at 833.411 kb on + strand, within DVU0744 at 833.419 kb on - strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.681 kb on - strand, within DVU0744 at 833.774 kb on - strand, within DVU0744 at 833.798 kb on + strand, within DVU0744 at 833.855 kb on + strand, within DVU0744 at 833.857 kb on + strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.948 kb on + strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 834.143 kb on + strand at 834.556 kb on + strand, within DVU0745 at 834.572 kb on + strand, within DVU0745 at 834.603 kb on - strand, within DVU0745 at 834.604 kb on - strand, within DVU0745 at 834.791 kb on + strand, within DVU0745 at 834.857 kb on - strand, within DVU0745 at 834.928 kb on + strand, within DVU0745 at 835.041 kb on - strand, within DVU0745 at 835.097 kb on - strand, within DVU0745 at 835.116 kb on - strand, within DVU0745
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine as nutrient 10mM remove 831,598 - DVU0743 0.56 -1.8 831,641 - DVU0743 0.59 -0.4 831,656 - DVU0743 0.59 -0.8 831,727 + DVU0743 0.63 +2.0 831,815 + DVU0743 0.67 -0.2 831,858 + DVU0743 0.69 -0.3 831,937 - DVU0743 0.73 +0.5 831,937 - DVU0743 0.73 -0.5 831,965 + DVU0743 0.75 +3.2 831,973 - DVU0743 0.75 +1.6 831,974 - DVU0743 0.75 +0.8 832,007 + DVU0743 0.77 +0.3 832,030 - DVU0743 0.78 +2.0 832,030 - DVU0743 0.78 -1.2 832,065 - DVU0743 0.80 +1.1 832,065 - DVU0743 0.80 -1.0 832,157 + DVU0743 0.84 +0.0 832,162 + DVU0743 0.85 -0.7 832,162 + DVU0743 0.85 -0.0 832,167 + DVU0743 0.85 +1.2 832,167 + DVU0743 0.85 -1.8 832,175 - DVU0743 0.85 -1.5 832,298 - +5.2 832,347 - -0.5 832,348 + -0.8 832,390 - +1.3 832,390 - -1.6 832,390 - -1.8 832,400 - -1.6 832,438 + -1.0 832,444 - +0.4 832,634 + -0.3 832,651 + DVU0744 0.11 -0.5 832,687 - DVU0744 0.13 +2.5 832,696 - DVU0744 0.13 -1.4 832,767 + DVU0744 0.17 +2.8 832,789 + DVU0744 0.19 -0.6 832,832 - DVU0744 0.21 -2.1 832,890 - DVU0744 0.25 -1.6 832,999 + DVU0744 0.31 -1.7 833,166 - DVU0744 0.41 +0.6 833,269 + DVU0744 0.47 -1.9 833,277 + DVU0744 0.47 -2.8 833,340 + DVU0744 0.51 +1.5 833,404 - DVU0744 0.55 +1.6 833,411 + DVU0744 0.55 -2.6 833,419 - DVU0744 0.56 -0.9 833,612 + DVU0744 0.67 -2.0 833,612 + DVU0744 0.67 -1.2 833,681 - DVU0744 0.71 +0.3 833,774 - DVU0744 0.76 +1.2 833,798 + DVU0744 0.78 +0.3 833,855 + DVU0744 0.81 -1.6 833,857 + DVU0744 0.81 -0.6 833,865 - DVU0744 0.82 -1.9 833,865 - DVU0744 0.82 -2.5 833,890 + DVU0744 0.83 -1.9 833,890 + DVU0744 0.83 -0.7 833,890 + DVU0744 0.83 -2.6 833,948 + DVU0744 0.87 -0.9 833,956 - DVU0744 0.87 -1.2 833,956 - DVU0744 0.87 -0.2 833,966 - DVU0744 0.88 +1.0 833,966 - DVU0744 0.88 +1.3 834,143 + +2.8 834,556 + DVU0745 0.18 -0.8 834,572 + DVU0745 0.20 -1.3 834,603 - DVU0745 0.24 -0.3 834,604 - DVU0745 0.24 -1.0 834,791 + DVU0745 0.47 +0.4 834,857 - DVU0745 0.55 +1.0 834,928 + DVU0745 0.63 -0.8 835,041 - DVU0745 0.77 +1.7 835,097 - DVU0745 0.84 +0.4 835,116 - DVU0745 0.86 -0.9
Or see this region's nucleotide sequence