Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2293

Experiment: 9:9 LD Cycle Bioreactor

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	9:9 LD Cycle Bioreactor
2,362,741	-		Synpcc7942_2292	0.59	-1.0
2,362,785	+		Synpcc7942_2292	0.61	-0.0
2,362,799	+		Synpcc7942_2292	0.62	-1.8
2,362,804	+		Synpcc7942_2292	0.62	-1.8
2,362,982	-		Synpcc7942_2292	0.70	-1.0
2,362,982	-		Synpcc7942_2292	0.70	-0.8
2,363,088	-		Synpcc7942_2292	0.74	-2.9
2,363,194	+		Synpcc7942_2292	0.79	-0.0
2,363,217	-		Synpcc7942_2292	0.80	-0.4
2,363,232	-		Synpcc7942_2292	0.81	-0.1
2,363,237	-		Synpcc7942_2292	0.81	-2.6
2,363,239	+		Synpcc7942_2292	0.81	-0.5
2,363,242	-		Synpcc7942_2292	0.81	-1.3
2,363,248	-		Synpcc7942_2292	0.82	+0.5
2,363,262	+		Synpcc7942_2292	0.82	+0.5
2,363,273	+		Synpcc7942_2292	0.83	-0.9
2,363,281	-		Synpcc7942_2292	0.83	-0.1
2,363,281	-		Synpcc7942_2292	0.83	-0.8
2,363,281	-		Synpcc7942_2292	0.83	-0.6
2,363,281	-		Synpcc7942_2292	0.83	+0.5
2,363,319	+		Synpcc7942_2292	0.85	+0.5
2,363,354	-		Synpcc7942_2292	0.86	-0.8
2,363,366	+		Synpcc7942_2292	0.87	-1.6
2,363,379	+		Synpcc7942_2292	0.87	+1.5
2,363,486	+				-0.7
2,363,516	-				+0.5
2,363,516	-				-0.1
2,363,524	+				-0.7
2,363,573	-				-0.5
2,363,576	+				+1.5
2,363,584	-				-0.5
2,363,584	-				-1.0
2,363,587	+				+0.5
2,363,629	-				+0.5
2,363,641	-				+0.4
2,363,643	+				-0.5
2,363,643	+				+0.7
2,363,666	+				-0.3
2,363,666	+				-1.0
2,363,666	+				+2.5
2,363,668	-				+0.0
2,363,669	-				-0.0
2,363,669	-				+0.2
2,363,674	-				-0.3
2,363,674	-				+0.3
2,363,674	-				+0.3
2,363,674	-				+1.2
2,363,674	-				+0.5
2,363,693	+				-1.6
2,363,708	+				-0.1
2,363,721	-		Synpcc7942_2293	0.11	-0.5
2,363,721	-		Synpcc7942_2293	0.11	-0.4
2,363,761	+		Synpcc7942_2293	0.20	-0.3
2,363,796	+		Synpcc7942_2293	0.28	+0.5
2,363,804	-		Synpcc7942_2293	0.30	-0.3
2,363,807	+		Synpcc7942_2293	0.30	-0.1
2,363,823	+		Synpcc7942_2293	0.34	+0.3
2,363,825	-		Synpcc7942_2293	0.34	+0.5
2,363,855	+		Synpcc7942_2293	0.41	-1.3
2,363,863	-		Synpcc7942_2293	0.43	-0.4
2,363,880	+		Synpcc7942_2293	0.47	-0.5
2,363,880	+		Synpcc7942_2293	0.47	-1.1
2,363,982	-		Synpcc7942_2293	0.69	+0.5
2,364,013	-		Synpcc7942_2293	0.76	-0.5
2,364,031	+		Synpcc7942_2293	0.80	-0.5
2,364,047	+		Synpcc7942_2293	0.84	+0.6
2,364,054	-		Synpcc7942_2293	0.85	-0.6
2,364,055	-		Synpcc7942_2293	0.86	-0.8
2,364,114	-				-0.6
2,364,122	-				-0.2
2,364,142	+				-1.6
2,364,144	-				-0.1
2,364,156	-				+1.0
2,364,265	+		Synpcc7942_2294	0.14	+0.0
2,364,265	+		Synpcc7942_2294	0.14	-0.1
2,364,271	-		Synpcc7942_2294	0.14	+0.5
2,364,273	-		Synpcc7942_2294	0.14	+0.5
2,364,273	-		Synpcc7942_2294	0.14	+0.2
2,364,273	-		Synpcc7942_2294	0.14	-0.8
2,364,273	-		Synpcc7942_2294	0.14	-0.1
2,364,292	+		Synpcc7942_2294	0.17	-0.1
2,364,292	+		Synpcc7942_2294	0.17	-0.1
2,364,293	-		Synpcc7942_2294	0.17	+0.5
2,364,300	-		Synpcc7942_2294	0.18	+0.0
2,364,302	+		Synpcc7942_2294	0.18	-0.3
2,364,346	-		Synpcc7942_2294	0.23	+0.2
2,364,348	-		Synpcc7942_2294	0.23	-0.5
2,364,358	+		Synpcc7942_2294	0.25	-1.1
2,364,365	-		Synpcc7942_2294	0.25	-0.0
2,364,366	-		Synpcc7942_2294	0.26	-0.1
2,364,366	-		Synpcc7942_2294	0.26	-0.1
2,364,388	+		Synpcc7942_2294	0.28	-0.1
2,364,388	+		Synpcc7942_2294	0.28	-1.1
2,364,389	-		Synpcc7942_2294	0.28	+0.5
2,364,396	+		Synpcc7942_2294	0.29	+0.6
2,364,396	-		Synpcc7942_2294	0.29	-1.3
2,364,406	-		Synpcc7942_2294	0.30	-0.2
2,364,420	-		Synpcc7942_2294	0.32	-0.5
2,364,421	-		Synpcc7942_2294	0.32	+0.0
2,364,426	+		Synpcc7942_2294	0.33	-0.1
2,364,433	+		Synpcc7942_2294	0.34	-0.7
2,364,441	-		Synpcc7942_2294	0.35	-0.1
2,364,447	+				+0.5
2,364,455	-		Synpcc7942_2294	0.36	-0.1
2,364,460	+		Synpcc7942_2294	0.37	+2.1
2,364,470	+		Synpcc7942_2294	0.38	-0.3
2,364,470	+		Synpcc7942_2294	0.38	+1.1
2,364,470	+		Synpcc7942_2294	0.38	-0.5
2,364,478	-		Synpcc7942_2294	0.39	+0.7
2,364,480	+		Synpcc7942_2294	0.39	-0.4
2,364,500	+		Synpcc7942_2294	0.42	-0.6
2,364,508	-		Synpcc7942_2294	0.43	+0.5
2,364,513	-		Synpcc7942_2294	0.43	-0.6
2,364,529	+		Synpcc7942_2294	0.45	+0.3
2,364,529	+		Synpcc7942_2294	0.45	+0.5
2,364,535	+		Synpcc7942_2294	0.46	-0.1
2,364,535	-		Synpcc7942_2294	0.46	-0.2
2,364,544	-		Synpcc7942_2294	0.47	-0.1
2,364,587	-		Synpcc7942_2294	0.52	-0.4
2,364,589	+		Synpcc7942_2294	0.52	-1.3
2,364,614	+		Synpcc7942_2294	0.55	+1.3
2,364,614	+		Synpcc7942_2294	0.55	+0.1
2,364,614	+		Synpcc7942_2294	0.55	-0.1
2,364,637	+		Synpcc7942_2294	0.58	-0.8
2,364,639	+		Synpcc7942_2294	0.58	+0.5
2,364,639	+		Synpcc7942_2294	0.58	+0.5
2,364,639	+		Synpcc7942_2294	0.58	+1.5
2,364,639	+		Synpcc7942_2294	0.58	+0.2
2,364,639	+		Synpcc7942_2294	0.58	+0.0
2,364,639	+		Synpcc7942_2294	0.58	-0.3
2,364,645	-		Synpcc7942_2294	0.59	+0.5
2,364,647	-		Synpcc7942_2294	0.59	-1.0
2,364,647	-		Synpcc7942_2294	0.59	+2.5
2,364,647	-		Synpcc7942_2294	0.59	-1.1
2,364,705	+		Synpcc7942_2294	0.66	-0.3
2,364,739	+		Synpcc7942_2294	0.70	+0.7
2,364,747	-		Synpcc7942_2294	0.71	+0.7
2,364,756	+		Synpcc7942_2294	0.72	-0.1
2,364,757	-		Synpcc7942_2294	0.72	-0.7
2,364,787	-		Synpcc7942_2294	0.76	-0.3
2,364,802	+		Synpcc7942_2294	0.78	-1.7
2,364,802	+		Synpcc7942_2294	0.78	-0.1
2,364,810	+		Synpcc7942_2294	0.79	+1.1
2,364,810	-		Synpcc7942_2294	0.79	+0.2
2,364,810	-		Synpcc7942_2294	0.79	-0.6
2,364,810	-		Synpcc7942_2294	0.79	+1.9
2,364,810	-		Synpcc7942_2294	0.79	-0.4
2,364,810	-		Synpcc7942_2294	0.79	+1.5
2,364,810	-		Synpcc7942_2294	0.79	+0.1
2,364,810	-		Synpcc7942_2294	0.79	-1.5
2,364,835	+		Synpcc7942_2294	0.82	+0.1
2,364,851	+		Synpcc7942_2294	0.84	-0.5
2,364,899	-		Synpcc7942_2294	0.89	-0.4
2,364,923	+				+0.6
2,364,926	-				+1.0
2,364,977	+				+0.8
2,364,985	-				+0.5
2,364,985	-				-0.2
2,364,997	+				+0.1
2,365,007	+				+1.1
2,365,012	+				-0.3
2,365,015	-				-1.6
2,365,015	-				+0.4
2,365,015	-				+1.2
2,365,018	+				+0.7
2,365,052	+				+0.5
2,365,052	+				+0.8
2,365,060	-				-2.1
2,365,074	+				-0.4
2,365,082	-				+1.5
2,365,088	-				+0.3
2,365,113	-		Synpcc7942_2295	0.11	-0.2