Experiment: KB with Lupeol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3711 and Psyr_3712 are separated by 569 nucleotides Psyr_3712 and Psyr_3713 are separated by 421 nucleotides
Psyr_3711: Psyr_3711 - Dienelactone hydrolase, at 4,397,623 to 4,398,411
_3711
Psyr_3712: Psyr_3712 - conserved hypothetical protein, at 4,398,981 to 4,399,514
_3712
Psyr_3713: Psyr_3713 - 4'-phosphopantetheinyl transferase, at 4,399,936 to 4,400,670
_3713
Position (kb) 4398
4399
4400 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 4398.248 kb on - strand, within Psyr_3711 at 4398.402 kb on - strand at 4398.402 kb on - strand at 4398.429 kb on + strand at 4398.430 kb on - strand at 4398.450 kb on - strand at 4398.985 kb on + strand at 4398.986 kb on - strand at 4398.986 kb on - strand at 4399.042 kb on + strand, within Psyr_3712 at 4399.070 kb on - strand, within Psyr_3712 at 4399.070 kb on - strand, within Psyr_3712 at 4399.070 kb on - strand, within Psyr_3712 at 4399.099 kb on + strand, within Psyr_3712 at 4399.099 kb on + strand, within Psyr_3712 at 4399.100 kb on - strand, within Psyr_3712 at 4399.100 kb on - strand, within Psyr_3712 at 4399.257 kb on + strand, within Psyr_3712 at 4399.258 kb on - strand, within Psyr_3712 at 4399.286 kb on + strand, within Psyr_3712 at 4399.286 kb on + strand, within Psyr_3712 at 4399.286 kb on + strand, within Psyr_3712 at 4399.287 kb on - strand, within Psyr_3712 at 4399.287 kb on - strand, within Psyr_3712 at 4399.287 kb on - strand, within Psyr_3712 at 4399.359 kb on + strand, within Psyr_3712 at 4399.359 kb on + strand, within Psyr_3712 at 4399.360 kb on - strand, within Psyr_3712 at 4399.414 kb on - strand, within Psyr_3712 at 4399.498 kb on + strand at 4399.498 kb on + strand at 4399.498 kb on + strand at 4399.498 kb on + strand at 4399.498 kb on + strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.499 kb on - strand at 4399.549 kb on + strand at 4399.564 kb on + strand at 4399.564 kb on + strand at 4399.565 kb on - strand at 4399.565 kb on - strand at 4399.574 kb on + strand at 4399.575 kb on - strand at 4399.575 kb on - strand at 4399.575 kb on - strand at 4399.575 kb on - strand at 4399.663 kb on - strand at 4399.663 kb on - strand at 4399.663 kb on - strand at 4399.778 kb on - strand at 4399.891 kb on + strand at 4399.891 kb on + strand at 4399.891 kb on + strand at 4399.895 kb on + strand at 4399.896 kb on - strand at 4399.896 kb on - strand at 4399.896 kb on - strand at 4399.902 kb on - strand at 4399.955 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Lupeol 10 mM remove 4,398,248 - Psyr_3711 0.79 -0.1 4,398,402 - -1.2 4,398,402 - -1.0 4,398,429 + +1.3 4,398,430 - -0.0 4,398,450 - -0.3 4,398,985 + +2.6 4,398,986 - +0.7 4,398,986 - +3.9 4,399,042 + Psyr_3712 0.11 +1.5 4,399,070 - Psyr_3712 0.17 -0.2 4,399,070 - Psyr_3712 0.17 +1.2 4,399,070 - Psyr_3712 0.17 +0.5 4,399,099 + Psyr_3712 0.22 -0.6 4,399,099 + Psyr_3712 0.22 +1.1 4,399,100 - Psyr_3712 0.22 +1.6 4,399,100 - Psyr_3712 0.22 +0.1 4,399,257 + Psyr_3712 0.52 +2.8 4,399,258 - Psyr_3712 0.52 +0.0 4,399,286 + Psyr_3712 0.57 -0.7 4,399,286 + Psyr_3712 0.57 +1.2 4,399,286 + Psyr_3712 0.57 -0.5 4,399,287 - Psyr_3712 0.57 +1.4 4,399,287 - Psyr_3712 0.57 -0.0 4,399,287 - Psyr_3712 0.57 -0.8 4,399,359 + Psyr_3712 0.71 -0.9 4,399,359 + Psyr_3712 0.71 +0.0 4,399,360 - Psyr_3712 0.71 -0.1 4,399,414 - Psyr_3712 0.81 +3.3 4,399,498 + +1.5 4,399,498 + -0.0 4,399,498 + -0.2 4,399,498 + +0.4 4,399,498 + +0.0 4,399,499 - +0.1 4,399,499 - -0.3 4,399,499 - +0.5 4,399,499 - +0.1 4,399,499 - +0.4 4,399,499 - +0.6 4,399,499 - +1.0 4,399,499 - +0.5 4,399,499 - -0.8 4,399,549 + -1.0 4,399,564 + +1.0 4,399,564 + +1.1 4,399,565 - +3.6 4,399,565 - -0.0 4,399,574 + -0.6 4,399,575 - -0.0 4,399,575 - +0.5 4,399,575 - +0.5 4,399,575 - +0.2 4,399,663 - +1.0 4,399,663 - -0.5 4,399,663 - -0.6 4,399,778 - -2.3 4,399,891 + +0.7 4,399,891 + +1.1 4,399,891 + +0.3 4,399,895 + -1.3 4,399,896 - +0.6 4,399,896 - -2.7 4,399,896 - -1.9 4,399,902 - +0.9 4,399,955 + +0.7
Or see this region's nucleotide sequence