Experiment: KB with Lupeol 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3175 and Psyr_3176 are separated by 16 nucleotides Psyr_3176 and Psyr_3177 overlap by 1 nucleotides
Psyr_3175: Psyr_3175 - seryl-tRNA synthetase, at 3,802,292 to 3,803,572
_3175
Psyr_3176: Psyr_3176 - camphor resistance protein CrcB, at 3,803,589 to 3,803,963
_3176
Psyr_3177: Psyr_3177 - Recombination protein MgsA, at 3,803,963 to 3,805,285
_3177
Position (kb) 3803
3804 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 3803.674 kb on - strand, within Psyr_3176 at 3803.740 kb on - strand, within Psyr_3176 at 3803.807 kb on - strand, within Psyr_3176 at 3803.812 kb on - strand, within Psyr_3176 at 3803.952 kb on - strand at 3804.061 kb on - strand at 3804.064 kb on - strand at 3804.064 kb on - strand at 3804.094 kb on - strand at 3804.094 kb on - strand at 3804.112 kb on - strand, within Psyr_3177 at 3804.142 kb on - strand, within Psyr_3177 at 3804.259 kb on - strand, within Psyr_3177 at 3804.292 kb on - strand, within Psyr_3177 at 3804.347 kb on + strand, within Psyr_3177 at 3804.347 kb on + strand, within Psyr_3177 at 3804.347 kb on + strand, within Psyr_3177 at 3804.347 kb on + strand, within Psyr_3177 at 3804.348 kb on - strand, within Psyr_3177 at 3804.348 kb on - strand, within Psyr_3177 at 3804.348 kb on - strand, within Psyr_3177 at 3804.438 kb on + strand, within Psyr_3177 at 3804.439 kb on - strand, within Psyr_3177 at 3804.439 kb on - strand, within Psyr_3177 at 3804.439 kb on - strand, within Psyr_3177 at 3804.481 kb on - strand, within Psyr_3177 at 3804.540 kb on + strand, within Psyr_3177 at 3804.540 kb on + strand, within Psyr_3177 at 3804.541 kb on - strand, within Psyr_3177 at 3804.541 kb on - strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.813 kb on + strand, within Psyr_3177 at 3804.814 kb on - strand, within Psyr_3177 at 3804.814 kb on - strand, within Psyr_3177 at 3804.907 kb on - strand, within Psyr_3177 at 3804.907 kb on - strand, within Psyr_3177
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Lupeol 10 mM remove 3,803,674 - Psyr_3176 0.23 +0.3 3,803,740 - Psyr_3176 0.40 -0.7 3,803,807 - Psyr_3176 0.58 +1.0 3,803,812 - Psyr_3176 0.59 +0.5 3,803,952 - +0.4 3,804,061 - -0.0 3,804,064 - +1.0 3,804,064 - -2.2 3,804,094 - -0.2 3,804,094 - +1.1 3,804,112 - Psyr_3177 0.11 -1.4 3,804,142 - Psyr_3177 0.14 -0.5 3,804,259 - Psyr_3177 0.22 +1.9 3,804,292 - Psyr_3177 0.25 +2.4 3,804,347 + Psyr_3177 0.29 +1.6 3,804,347 + Psyr_3177 0.29 +1.9 3,804,347 + Psyr_3177 0.29 +0.3 3,804,347 + Psyr_3177 0.29 -0.4 3,804,348 - Psyr_3177 0.29 -0.6 3,804,348 - Psyr_3177 0.29 +3.2 3,804,348 - Psyr_3177 0.29 -1.7 3,804,438 + Psyr_3177 0.36 +1.2 3,804,439 - Psyr_3177 0.36 -0.9 3,804,439 - Psyr_3177 0.36 +0.2 3,804,439 - Psyr_3177 0.36 +0.3 3,804,481 - Psyr_3177 0.39 +0.5 3,804,540 + Psyr_3177 0.44 +0.1 3,804,540 + Psyr_3177 0.44 -2.3 3,804,541 - Psyr_3177 0.44 +0.9 3,804,541 - Psyr_3177 0.44 +0.6 3,804,813 + Psyr_3177 0.64 -1.4 3,804,813 + Psyr_3177 0.64 -1.1 3,804,813 + Psyr_3177 0.64 -1.3 3,804,813 + Psyr_3177 0.64 -0.2 3,804,813 + Psyr_3177 0.64 -0.1 3,804,813 + Psyr_3177 0.64 +1.3 3,804,814 - Psyr_3177 0.64 -0.5 3,804,814 - Psyr_3177 0.64 +0.3 3,804,907 - Psyr_3177 0.71 -0.9 3,804,907 - Psyr_3177 0.71 +0.6
Or see this region's nucleotide sequence