Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5136

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
6,092,467	-		Psyr_5135	0.58	-0.5
6,092,530	-		Psyr_5135	0.84	-1.5
6,093,238	-				+1.2
6,093,238	-				+0.7
6,093,238	-				+1.0
6,093,238	-				+0.4
6,093,240	-				+3.4
6,093,240	-				+1.1
6,093,293	-				+0.2
6,093,293	-				+1.5
6,093,313	-				-0.1
6,093,313	-				+0.5
6,093,316	+				-0.2
6,093,317	-				+0.1
6,093,317	-				+0.3
6,093,327	+				-0.4
6,093,328	-				+1.1
6,093,328	-				-1.8
6,093,337	-				-0.4
6,093,339	-				-0.3
6,093,345	+				+1.4
6,093,406	+				+0.1
6,093,494	-				-0.0
6,093,517	+				+0.0
6,093,518	-				-0.1
6,093,518	-				-0.6
6,093,553	+				+2.1
6,093,554	-				-1.1
6,093,599	+				-1.5
6,093,599	+				-0.0
6,093,599	+				+1.5
6,093,599	+				+0.5
6,093,599	+				-0.5
6,093,599	+				-1.3
6,093,599	+				-2.8
6,093,600	-				+0.3
6,093,601	+				-0.1
6,093,601	+				+0.5
6,093,602	-				-1.2
6,093,602	-				+0.1
6,093,620	+				-0.0
6,093,620	+				+0.6
6,093,620	+				-0.4
6,093,621	-				-0.8
6,093,621	-				+0.6
6,093,621	-				-0.6