Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4580

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
5,441,087	+				+0.4
5,441,087	+				-2.7
5,441,087	+				-0.7
5,441,087	+				+2.1
5,441,087	+				-0.1
5,441,087	+				-0.3
5,441,087	+				+0.4
5,441,087	+				+0.3
5,441,087	+				+2.0
5,441,087	+				-0.3
5,441,087	+				-0.6
5,441,087	+				+0.5
5,441,087	+				-0.9
5,441,087	+				-2.2
5,441,087	+				-0.1
5,441,087	+				-1.3
5,441,087	+				-1.1
5,441,087	+				-0.2
5,441,087	+				-0.2
5,441,087	+				+0.4
5,441,087	+				+1.0
5,441,087	+				+0.3
5,441,087	+				-0.1
5,441,087	+				-1.2
5,441,087	+				+0.5
5,441,087	+				+1.4
5,441,087	+				+0.6
5,441,087	+				-0.9
5,441,087	+				+0.5
5,441,087	+				+0.1
5,441,087	+				-1.2
5,441,087	+				+0.4
5,441,088	-				-0.8
5,441,088	-				+1.3
5,441,088	-				-0.2
5,441,088	-				+0.2
5,441,088	-				-1.5
5,441,088	-				+0.1
5,441,088	-				+2.1
5,441,088	-				+0.2
5,441,088	-				-0.3
5,441,088	-				+0.2
5,441,088	-				-0.5
5,441,088	-				+1.3
5,441,088	-				+0.3
5,441,088	-				-0.8
5,441,088	-				-0.3
5,441,088	-				+0.0
5,441,088	-				+0.7
5,441,166	+				+0.2
5,441,167	-				-0.4
5,441,257	+		Psyr_4579	0.13	+0.7
5,441,360	+		Psyr_4579	0.26	-0.2
5,441,360	+		Psyr_4579	0.26	+1.5
5,441,384	+		Psyr_4579	0.29	-0.3
5,441,384	+		Psyr_4579	0.29	+0.7
5,441,384	+		Psyr_4579	0.29	-0.0
5,441,384	+		Psyr_4579	0.29	-0.2
5,441,385	-		Psyr_4579	0.29	+1.0
5,441,385	-		Psyr_4579	0.29	+0.3
5,441,385	-		Psyr_4579	0.29	+1.1
5,441,475	+		Psyr_4579	0.39	+0.6
5,441,475	+		Psyr_4579	0.39	+2.2
5,441,475	+		Psyr_4579	0.39	+0.1
5,441,475	+		Psyr_4579	0.39	-0.0
5,441,475	+		Psyr_4579	0.39	+1.4
5,441,476	-		Psyr_4579	0.40	-0.3
5,441,476	-		Psyr_4579	0.40	-1.5
5,441,659	+		Psyr_4579	0.61	+0.5
5,441,729	-		Psyr_4579	0.70	+0.6
5,441,965	-				-0.3
5,442,114	+		Psyr_4580	0.13	-0.9
5,442,115	-		Psyr_4580	0.13	-1.4
5,442,286	-		Psyr_4580	0.29	-2.4
5,442,493	+		Psyr_4580	0.48	-1.4
5,442,493	+		Psyr_4580	0.48	-2.0
5,442,494	-		Psyr_4580	0.49	-3.1
5,442,633	+		Psyr_4580	0.62	-3.5
5,442,634	-		Psyr_4580	0.62	-0.8
5,443,024	-				-1.3
5,443,033	+				-2.8
5,443,034	-				-0.3
5,443,244	-		Psyr_4581	0.33	-0.2
5,443,480	+		Psyr_4581	0.72	-0.8
5,443,480	+		Psyr_4581	0.72	-2.1
5,443,611	+				-0.3
5,443,611	+				-1.0
5,443,611	+				-1.7
5,443,611	+				-1.2
5,443,612	-				-1.7
5,443,612	-				-0.6
5,443,612	-				+0.8
5,443,616	-				-0.1
5,443,626	+				-1.3
5,443,627	-				-2.0
5,443,627	-				-0.8
5,443,627	-				-1.5
5,443,627	-				+0.7
5,443,627	-				-0.3
5,443,671	-				-0.1
5,443,772	+				-0.4
5,443,772	+				-1.3
5,443,772	+				-1.5
5,443,773	-				-0.0
5,443,779	-				-0.4
5,443,806	+				-0.8
5,443,806	+				+1.0
5,443,806	+				+1.2
5,443,911	-				+0.2
5,443,935	+				-0.0
5,443,935	+				+1.0
5,443,935	+				-1.0
5,443,935	+				-1.8
5,443,936	-				+1.7
5,443,971	+				-1.9