Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4181

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
4,974,204	-				-0.7
4,974,204	-				+0.1
4,974,204	-				-0.3
4,974,204	-				-0.3
4,974,204	-				+0.6
4,974,204	-				-1.3
4,974,204	-				+0.9
4,974,204	-				-0.1
4,974,204	-				-0.1
4,974,204	-				+0.9
4,974,204	-				-0.7
4,974,204	-				-1.2
4,974,204	-				-0.3
4,974,204	-				-0.2
4,974,204	-				+0.5
4,974,204	-				-1.4
4,974,204	-				-0.9
4,974,206	-				-1.2
4,974,206	-				-1.7
4,974,206	-				-2.4
4,974,206	-				-0.8
4,974,206	-				+1.3
4,974,237	-				-0.3
4,974,237	-				+0.9
4,976,203	-				+1.1
4,976,203	-				+0.5
4,976,203	-				+0.5
4,976,203	-				+0.7
4,976,203	-				-0.4
4,976,203	-				+0.3
4,976,203	-				-1.7
4,976,203	-				-0.3
4,976,203	-				+1.2
4,976,204	-				-0.9
4,976,214	-				+2.5
4,976,229	-				+1.9
4,976,305	-		Psyr_RNA63	0.73	+2.1
4,976,345	-				-0.4
4,976,345	-				-0.7
4,976,345	-				+1.2
4,976,347	-				+0.5
4,976,347	-				-1.3
4,976,347	-				-0.7
4,976,347	-				+0.0
4,976,385	-				-0.5
4,976,385	-				+0.6
4,976,385	-				-0.3
4,976,385	-				-0.0
4,976,385	-				+2.7
4,976,385	-				-0.9
4,976,555	-				-1.3
4,976,555	-				-2.5
4,976,555	-				-0.8
4,976,578	-				-1.2