Experiment: KB with Avocatin B 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3759 and Psyr_3760 overlap by 8 nucleotides Psyr_3760 and Psyr_3761 are separated by 134 nucleotides
Psyr_3759: Psyr_3759 - conserved hypothetical protein, at 4,476,742 to 4,478,040
_3759
Psyr_3760: Psyr_3760 - VacJ-like lipoprotein, at 4,478,033 to 4,478,845
_3760
Psyr_3761: Psyr_3761 - conserved hypothetical protein, at 4,478,980 to 4,479,570
_3761
Position (kb) 4476
4477
4478
4479 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 4475.889 kb on + strand at 4475.889 kb on + strand at 4475.889 kb on + strand at 4475.889 kb on + strand at 4475.889 kb on + strand at 4475.890 kb on - strand at 4475.891 kb on + strand at 4475.891 kb on + strand at 4475.892 kb on - strand at 4475.892 kb on - strand at 4476.087 kb on + strand at 4476.087 kb on + strand at 4476.088 kb on - strand at 4476.089 kb on + strand at 4476.089 kb on + strand at 4476.090 kb on - strand at 4476.099 kb on - strand at 4476.145 kb on + strand at 4476.219 kb on - strand at 4476.264 kb on + strand at 4476.264 kb on + strand at 4476.264 kb on + strand at 4476.265 kb on - strand at 4476.265 kb on - strand at 4476.265 kb on - strand at 4476.325 kb on + strand at 4476.394 kb on + strand at 4476.395 kb on - strand at 4476.432 kb on + strand at 4476.432 kb on + strand at 4476.432 kb on + strand at 4476.432 kb on + strand at 4476.433 kb on - strand at 4476.433 kb on - strand at 4476.434 kb on + strand at 4476.474 kb on + strand at 4476.474 kb on + strand at 4476.474 kb on + strand at 4476.475 kb on - strand at 4476.475 kb on - strand at 4476.475 kb on - strand at 4476.475 kb on - strand at 4476.575 kb on + strand at 4476.575 kb on + strand at 4476.575 kb on + strand at 4476.576 kb on - strand at 4476.576 kb on - strand at 4476.576 kb on - strand at 4476.581 kb on - strand at 4476.603 kb on + strand at 4476.604 kb on - strand at 4476.632 kb on + strand at 4476.632 kb on + strand at 4476.633 kb on - strand at 4476.645 kb on + strand at 4476.645 kb on + strand at 4476.646 kb on - strand at 4476.649 kb on + strand at 4476.684 kb on + strand at 4476.685 kb on - strand at 4476.685 kb on - strand at 4476.685 kb on - strand at 4476.706 kb on + strand at 4476.737 kb on + strand at 4476.737 kb on + strand at 4476.738 kb on - strand at 4476.771 kb on + strand at 4476.772 kb on - strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.773 kb on + strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.774 kb on - strand at 4476.788 kb on + strand at 4476.788 kb on + strand at 4476.788 kb on + strand at 4476.789 kb on - strand at 4476.829 kb on + strand at 4476.829 kb on + strand at 4476.829 kb on + strand at 4476.829 kb on + strand at 4476.830 kb on - strand at 4476.830 kb on - strand at 4476.830 kb on - strand at 4476.830 kb on - strand at 4476.830 kb on - strand at 4476.830 kb on - strand at 4476.931 kb on + strand, within Psyr_3759 at 4476.931 kb on + strand, within Psyr_3759 at 4476.931 kb on + strand, within Psyr_3759 at 4476.932 kb on - strand, within Psyr_3759 at 4477.004 kb on - strand, within Psyr_3759 at 4477.069 kb on + strand, within Psyr_3759 at 4477.070 kb on - strand, within Psyr_3759 at 4477.070 kb on - strand, within Psyr_3759 at 4477.070 kb on - strand, within Psyr_3759 at 4477.071 kb on + strand, within Psyr_3759 at 4477.071 kb on + strand, within Psyr_3759 at 4477.105 kb on + strand, within Psyr_3759 at 4477.106 kb on - strand, within Psyr_3759 at 4477.109 kb on - strand, within Psyr_3759 at 4477.153 kb on + strand, within Psyr_3759 at 4477.154 kb on - strand, within Psyr_3759 at 4477.276 kb on + strand, within Psyr_3759 at 4477.276 kb on + strand, within Psyr_3759 at 4477.277 kb on - strand, within Psyr_3759 at 4477.277 kb on - strand, within Psyr_3759 at 4477.279 kb on + strand, within Psyr_3759 at 4477.279 kb on + strand, within Psyr_3759 at 4477.279 kb on + strand, within Psyr_3759 at 4477.279 kb on + strand, within Psyr_3759 at 4477.396 kb on + strand, within Psyr_3759 at 4477.396 kb on + strand, within Psyr_3759 at 4477.396 kb on + strand, within Psyr_3759 at 4477.397 kb on - strand, within Psyr_3759 at 4477.397 kb on - strand, within Psyr_3759 at 4477.446 kb on + strand at 4477.468 kb on + strand, within Psyr_3759 at 4477.468 kb on + strand, within Psyr_3759 at 4477.468 kb on + strand, within Psyr_3759 at 4477.468 kb on + strand, within Psyr_3759 at 4477.469 kb on - strand, within Psyr_3759 at 4477.469 kb on - strand, within Psyr_3759 at 4477.469 kb on - strand, within Psyr_3759 at 4477.516 kb on + strand, within Psyr_3759 at 4477.516 kb on + strand, within Psyr_3759 at 4477.517 kb on - strand, within Psyr_3759 at 4477.517 kb on - strand, within Psyr_3759 at 4477.603 kb on - strand, within Psyr_3759 at 4477.776 kb on + strand, within Psyr_3759 at 4477.776 kb on + strand, within Psyr_3759 at 4477.776 kb on + strand, within Psyr_3759 at 4477.776 kb on + strand, within Psyr_3759 at 4477.776 kb on + strand, within Psyr_3759 at 4477.777 kb on - strand, within Psyr_3759 at 4477.777 kb on - strand, within Psyr_3759 at 4477.777 kb on - strand, within Psyr_3759 at 4477.777 kb on - strand, within Psyr_3759 at 4477.837 kb on + strand, within Psyr_3759 at 4477.838 kb on - strand, within Psyr_3759 at 4477.852 kb on + strand, within Psyr_3759 at 4477.852 kb on + strand, within Psyr_3759 at 4477.852 kb on + strand, within Psyr_3759 at 4477.963 kb on + strand at 4477.970 kb on - strand at 4477.992 kb on + strand at 4477.992 kb on + strand at 4477.992 kb on + strand at 4477.992 kb on + strand at 4477.992 kb on + strand at 4477.993 kb on - strand at 4477.993 kb on - strand at 4477.996 kb on + strand at 4478.049 kb on + strand at 4478.246 kb on + strand at 4478.246 kb on + strand, within Psyr_3760 at 4478.246 kb on + strand, within Psyr_3760 at 4478.247 kb on - strand, within Psyr_3760 at 4478.247 kb on - strand, within Psyr_3760 at 4478.279 kb on + strand, within Psyr_3760 at 4478.292 kb on - strand, within Psyr_3760 at 4478.310 kb on + strand, within Psyr_3760 at 4478.311 kb on - strand, within Psyr_3760 at 4478.339 kb on + strand, within Psyr_3760 at 4478.339 kb on + strand, within Psyr_3760 at 4478.340 kb on - strand, within Psyr_3760 at 4478.567 kb on + strand, within Psyr_3760 at 4478.567 kb on + strand, within Psyr_3760 at 4478.567 kb on + strand, within Psyr_3760 at 4478.567 kb on + strand, within Psyr_3760 at 4478.589 kb on - strand, within Psyr_3760 at 4478.651 kb on + strand, within Psyr_3760 at 4478.744 kb on + strand, within Psyr_3760 at 4478.744 kb on + strand, within Psyr_3760 at 4478.744 kb on + strand, within Psyr_3760 at 4478.810 kb on + strand at 4478.811 kb on - strand at 4478.849 kb on + strand at 4478.858 kb on - strand at 4478.911 kb on + strand at 4478.912 kb on - strand at 4479.015 kb on + strand at 4479.016 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Avocatin B 10 mM remove 4,475,889 + +0.7 4,475,889 + +0.4 4,475,889 + +1.6 4,475,889 + +0.3 4,475,889 + -3.6 4,475,890 - +0.4 4,475,891 + -0.0 4,475,891 + +0.0 4,475,892 - -0.6 4,475,892 - -0.9 4,476,087 + -0.4 4,476,087 + -2.0 4,476,088 - -0.4 4,476,089 + +1.1 4,476,089 + +1.2 4,476,090 - -0.5 4,476,099 - +1.7 4,476,145 + +0.0 4,476,219 - -1.6 4,476,264 + -1.2 4,476,264 + +0.3 4,476,264 + -0.9 4,476,265 - -0.5 4,476,265 - +2.0 4,476,265 - -2.1 4,476,325 + +0.4 4,476,394 + +0.1 4,476,395 - +0.4 4,476,432 + +0.4 4,476,432 + +0.4 4,476,432 + +3.3 4,476,432 + -0.7 4,476,433 - -1.7 4,476,433 - +0.5 4,476,434 + +5.0 4,476,474 + -0.7 4,476,474 + +1.2 4,476,474 + +0.5 4,476,475 - -1.4 4,476,475 - -2.6 4,476,475 - -1.9 4,476,475 - -2.0 4,476,575 + -0.2 4,476,575 + +0.1 4,476,575 + +0.0 4,476,576 - +0.6 4,476,576 - -0.2 4,476,576 - -1.5 4,476,581 - -2.0 4,476,603 + +0.4 4,476,604 - -0.0 4,476,632 + +0.5 4,476,632 + -0.0 4,476,633 - -0.4 4,476,645 + -2.0 4,476,645 + +0.1 4,476,646 - -2.9 4,476,649 + +0.3 4,476,684 + -0.5 4,476,685 - +0.1 4,476,685 - -0.9 4,476,685 - -0.3 4,476,706 + -0.2 4,476,737 + -1.5 4,476,737 + -1.3 4,476,738 - -1.4 4,476,771 + -0.4 4,476,772 - +1.0 4,476,773 + -1.6 4,476,773 + -0.2 4,476,773 + -1.1 4,476,773 + -1.6 4,476,773 + -1.6 4,476,773 + -0.9 4,476,773 + +0.4 4,476,773 + +0.0 4,476,773 + -2.0 4,476,773 + -1.0 4,476,773 + -2.3 4,476,774 - -0.0 4,476,774 - -0.9 4,476,774 - -0.0 4,476,774 - -1.4 4,476,774 - -1.2 4,476,774 - -0.4 4,476,774 - -0.9 4,476,774 - -0.6 4,476,774 - +1.0 4,476,774 - -2.2 4,476,774 - -1.4 4,476,774 - +0.2 4,476,774 - -2.5 4,476,774 - -0.6 4,476,788 + -1.0 4,476,788 + -0.8 4,476,788 + -1.9 4,476,789 - +1.5 4,476,829 + +0.5 4,476,829 + -1.4 4,476,829 + -1.9 4,476,829 + -0.6 4,476,830 - -3.8 4,476,830 - -2.4 4,476,830 - -0.2 4,476,830 - +0.2 4,476,830 - -1.2 4,476,830 - -1.7 4,476,931 + Psyr_3759 0.15 -2.6 4,476,931 + Psyr_3759 0.15 -0.5 4,476,931 + Psyr_3759 0.15 -3.1 4,476,932 - Psyr_3759 0.15 -1.5 4,477,004 - Psyr_3759 0.20 -2.7 4,477,069 + Psyr_3759 0.25 -1.3 4,477,070 - Psyr_3759 0.25 -0.6 4,477,070 - Psyr_3759 0.25 -1.4 4,477,070 - Psyr_3759 0.25 -0.0 4,477,071 + Psyr_3759 0.25 -0.6 4,477,071 + Psyr_3759 0.25 -4.1 4,477,105 + Psyr_3759 0.28 -1.9 4,477,106 - Psyr_3759 0.28 -3.6 4,477,109 - Psyr_3759 0.28 -0.4 4,477,153 + Psyr_3759 0.32 +0.1 4,477,154 - Psyr_3759 0.32 -0.1 4,477,276 + Psyr_3759 0.41 -1.6 4,477,276 + Psyr_3759 0.41 +2.3 4,477,277 - Psyr_3759 0.41 -2.0 4,477,277 - Psyr_3759 0.41 -1.7 4,477,279 + Psyr_3759 0.41 -1.8 4,477,279 + Psyr_3759 0.41 -0.6 4,477,279 + Psyr_3759 0.41 +0.2 4,477,279 + Psyr_3759 0.41 -1.0 4,477,396 + Psyr_3759 0.50 -1.3 4,477,396 + Psyr_3759 0.50 -1.0 4,477,396 + Psyr_3759 0.50 -2.6 4,477,397 - Psyr_3759 0.50 -1.0 4,477,397 - Psyr_3759 0.50 -0.6 4,477,446 + -0.6 4,477,468 + Psyr_3759 0.56 -1.0 4,477,468 + Psyr_3759 0.56 -0.9 4,477,468 + Psyr_3759 0.56 -0.4 4,477,468 + Psyr_3759 0.56 -1.2 4,477,469 - Psyr_3759 0.56 -1.0 4,477,469 - Psyr_3759 0.56 -2.2 4,477,469 - Psyr_3759 0.56 -1.6 4,477,516 + Psyr_3759 0.60 -2.6 4,477,516 + Psyr_3759 0.60 -1.1 4,477,517 - Psyr_3759 0.60 -0.6 4,477,517 - Psyr_3759 0.60 -2.0 4,477,603 - Psyr_3759 0.66 -3.0 4,477,776 + Psyr_3759 0.80 -3.6 4,477,776 + Psyr_3759 0.80 -2.1 4,477,776 + Psyr_3759 0.80 -1.8 4,477,776 + Psyr_3759 0.80 +1.0 4,477,776 + Psyr_3759 0.80 -1.9 4,477,777 - Psyr_3759 0.80 +1.0 4,477,777 - Psyr_3759 0.80 -4.2 4,477,777 - Psyr_3759 0.80 -2.7 4,477,777 - Psyr_3759 0.80 +0.2 4,477,837 + Psyr_3759 0.84 -0.0 4,477,838 - Psyr_3759 0.84 -0.6 4,477,852 + Psyr_3759 0.85 -2.0 4,477,852 + Psyr_3759 0.85 -1.4 4,477,852 + Psyr_3759 0.85 -3.0 4,477,963 + -1.0 4,477,970 - -1.6 4,477,992 + -0.7 4,477,992 + -0.5 4,477,992 + -0.2 4,477,992 + -1.6 4,477,992 + -2.2 4,477,993 - -1.5 4,477,993 - -1.0 4,477,996 + -0.9 4,478,049 + +0.2 4,478,246 + -0.0 4,478,246 + Psyr_3760 0.26 -2.3 4,478,246 + Psyr_3760 0.26 -1.8 4,478,247 - Psyr_3760 0.26 -1.2 4,478,247 - Psyr_3760 0.26 -0.5 4,478,279 + Psyr_3760 0.30 -0.6 4,478,292 - Psyr_3760 0.32 -3.7 4,478,310 + Psyr_3760 0.34 +3.0 4,478,311 - Psyr_3760 0.34 -1.9 4,478,339 + Psyr_3760 0.38 -0.5 4,478,339 + Psyr_3760 0.38 -2.2 4,478,340 - Psyr_3760 0.38 -1.2 4,478,567 + Psyr_3760 0.66 -1.8 4,478,567 + Psyr_3760 0.66 -0.8 4,478,567 + Psyr_3760 0.66 +0.2 4,478,567 + Psyr_3760 0.66 -1.5 4,478,589 - Psyr_3760 0.68 +0.1 4,478,651 + Psyr_3760 0.76 -2.0 4,478,744 + Psyr_3760 0.87 +0.2 4,478,744 + Psyr_3760 0.87 +0.7 4,478,744 + Psyr_3760 0.87 -1.6 4,478,810 + -1.3 4,478,811 - -1.9 4,478,849 + -1.2 4,478,858 - -1.0 4,478,911 + +0.4 4,478,912 - +0.6 4,479,015 + +0.5 4,479,016 - -1.9
Or see this region's nucleotide sequence