Experiment: KB with Avocatin B 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3583 and Psyr_3584 are separated by 15 nucleotides Psyr_3584 and Psyr_3585 overlap by 1 nucleotides Psyr_3585 and Psyr_3586 overlap by 26 nucleotides
Psyr_3583: Psyr_3583 - condensin subunit ScpB, at 4,266,535 to 4,267,302
_3583
Psyr_3584: Psyr_3584 - condensin subunit ScpA, at 4,267,318 to 4,268,136
_3584
Psyr_3585: Psyr_3585 - Sua5/YciO/YrdC/YwlC, at 4,268,136 to 4,268,804
_3585
Psyr_3586: Psyr_3586 - Phosphoesterase PHP, N-terminal:PHP, C-terminal, at 4,268,779 to 4,269,642
_3586
Position (kb) 4267
4268
4269 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 4266.355 kb on + strand at 4266.355 kb on + strand at 4266.356 kb on - strand at 4266.383 kb on + strand at 4266.383 kb on + strand at 4266.384 kb on - strand at 4266.384 kb on - strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.444 kb on - strand at 4266.498 kb on - strand at 4266.498 kb on - strand at 4266.498 kb on - strand at 4266.529 kb on - strand at 4267.214 kb on + strand, within Psyr_3583 at 4267.214 kb on + strand, within Psyr_3583 at 4267.214 kb on + strand, within Psyr_3583 at 4267.214 kb on + strand, within Psyr_3583 at 4267.214 kb on + strand, within Psyr_3583 at 4267.215 kb on - strand, within Psyr_3583 at 4267.215 kb on - strand, within Psyr_3583 at 4267.313 kb on + strand at 4267.313 kb on + strand at 4267.314 kb on - strand at 4267.319 kb on + strand at 4267.319 kb on + strand at 4267.320 kb on - strand at 4267.731 kb on - strand, within Psyr_3584 at 4267.731 kb on - strand, within Psyr_3584 at 4267.895 kb on + strand, within Psyr_3584 at 4267.895 kb on + strand, within Psyr_3584 at 4267.896 kb on - strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.904 kb on + strand, within Psyr_3584 at 4267.905 kb on - strand, within Psyr_3584 at 4267.905 kb on - strand, within Psyr_3584 at 4267.905 kb on - strand, within Psyr_3584 at 4267.905 kb on - strand, within Psyr_3584 at 4267.905 kb on - strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.033 kb on + strand, within Psyr_3584 at 4268.034 kb on - strand, within Psyr_3584 at 4268.034 kb on - strand, within Psyr_3584 at 4268.034 kb on - strand, within Psyr_3584 at 4268.034 kb on - strand, within Psyr_3584 at 4268.034 kb on - strand, within Psyr_3584 at 4268.070 kb on - strand at 4268.231 kb on + strand, within Psyr_3585 at 4268.231 kb on + strand, within Psyr_3585 at 4268.294 kb on - strand, within Psyr_3585 at 4268.477 kb on - strand, within Psyr_3585 at 4268.477 kb on - strand, within Psyr_3585 at 4268.477 kb on - strand, within Psyr_3585 at 4268.653 kb on + strand, within Psyr_3585 at 4268.672 kb on - strand, within Psyr_3585 at 4268.769 kb on + strand at 4268.769 kb on + strand at 4268.794 kb on - strand at 4268.852 kb on + strand at 4268.853 kb on - strand at 4268.853 kb on - strand at 4268.984 kb on - strand, within Psyr_3586 at 4268.984 kb on - strand, within Psyr_3586 at 4268.984 kb on - strand, within Psyr_3586 at 4269.033 kb on + strand, within Psyr_3586 at 4269.050 kb on + strand, within Psyr_3586 at 4269.051 kb on - strand, within Psyr_3586
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Avocatin B 10 mM remove 4,266,355 + +1.1 4,266,355 + +0.1 4,266,356 - +1.3 4,266,383 + +0.8 4,266,383 + +0.1 4,266,384 - +0.6 4,266,384 - +0.8 4,266,387 + +0.6 4,266,387 + -2.2 4,266,387 + -1.6 4,266,387 + -0.2 4,266,387 + -1.5 4,266,387 + -0.7 4,266,387 + +0.5 4,266,387 + -0.2 4,266,387 + -0.6 4,266,387 + +1.7 4,266,388 - +1.2 4,266,388 - +0.3 4,266,388 - +0.5 4,266,388 - +0.5 4,266,388 - +0.8 4,266,388 - +0.1 4,266,388 - -0.2 4,266,388 - +1.3 4,266,388 - +1.6 4,266,388 - +0.6 4,266,388 - +1.0 4,266,388 - +0.7 4,266,388 - -0.2 4,266,388 - +0.3 4,266,388 - -1.1 4,266,388 - +0.1 4,266,388 - +0.6 4,266,388 - +0.1 4,266,388 - +1.2 4,266,388 - +0.4 4,266,388 - -0.0 4,266,444 - +0.4 4,266,498 - +0.6 4,266,498 - -0.5 4,266,498 - +0.4 4,266,529 - +1.8 4,267,214 + Psyr_3583 0.88 +0.8 4,267,214 + Psyr_3583 0.88 +0.7 4,267,214 + Psyr_3583 0.88 -0.8 4,267,214 + Psyr_3583 0.88 +0.3 4,267,214 + Psyr_3583 0.88 +1.3 4,267,215 - Psyr_3583 0.89 +1.0 4,267,215 - Psyr_3583 0.89 +4.0 4,267,313 + +0.4 4,267,313 + +0.6 4,267,314 - -1.7 4,267,319 + -0.4 4,267,319 + -1.1 4,267,320 - -1.2 4,267,731 - Psyr_3584 0.50 +0.5 4,267,731 - Psyr_3584 0.50 -1.4 4,267,895 + Psyr_3584 0.70 -0.2 4,267,895 + Psyr_3584 0.70 +0.2 4,267,896 - Psyr_3584 0.71 -0.8 4,267,904 + Psyr_3584 0.72 +4.9 4,267,904 + Psyr_3584 0.72 +0.4 4,267,904 + Psyr_3584 0.72 +0.6 4,267,904 + Psyr_3584 0.72 +0.8 4,267,904 + Psyr_3584 0.72 -0.7 4,267,904 + Psyr_3584 0.72 +1.3 4,267,904 + Psyr_3584 0.72 -1.0 4,267,904 + Psyr_3584 0.72 -0.9 4,267,905 - Psyr_3584 0.72 -0.4 4,267,905 - Psyr_3584 0.72 -0.2 4,267,905 - Psyr_3584 0.72 -1.1 4,267,905 - Psyr_3584 0.72 -1.2 4,267,905 - Psyr_3584 0.72 -0.0 4,268,033 + Psyr_3584 0.87 -2.2 4,268,033 + Psyr_3584 0.87 -0.5 4,268,033 + Psyr_3584 0.87 -2.3 4,268,033 + Psyr_3584 0.87 -1.0 4,268,033 + Psyr_3584 0.87 +1.3 4,268,033 + Psyr_3584 0.87 +1.2 4,268,033 + Psyr_3584 0.87 +2.8 4,268,034 - Psyr_3584 0.87 -1.4 4,268,034 - Psyr_3584 0.87 -0.9 4,268,034 - Psyr_3584 0.87 -1.2 4,268,034 - Psyr_3584 0.87 -0.4 4,268,034 - Psyr_3584 0.87 +0.4 4,268,070 - +3.4 4,268,231 + Psyr_3585 0.14 +0.8 4,268,231 + Psyr_3585 0.14 +0.1 4,268,294 - Psyr_3585 0.24 +0.6 4,268,477 - Psyr_3585 0.51 -0.5 4,268,477 - Psyr_3585 0.51 +0.8 4,268,477 - Psyr_3585 0.51 -1.3 4,268,653 + Psyr_3585 0.77 +0.7 4,268,672 - Psyr_3585 0.80 -0.0 4,268,769 + +0.2 4,268,769 + -0.2 4,268,794 - -2.2 4,268,852 + +2.4 4,268,853 - -0.2 4,268,853 - -0.0 4,268,984 - Psyr_3586 0.24 +3.4 4,268,984 - Psyr_3586 0.24 +0.6 4,268,984 - Psyr_3586 0.24 -0.3 4,269,033 + Psyr_3586 0.29 +0.1 4,269,050 + Psyr_3586 0.31 +0.4 4,269,051 - Psyr_3586 0.31 +0.7
Or see this region's nucleotide sequence