Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3521

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
4,195,699	-		Psyr_3520	0.37	-0.7
4,195,740	+		Psyr_3520	0.40	-0.1
4,195,971	+		Psyr_3520	0.57	+0.1
4,195,971	+		Psyr_3520	0.57	-0.5
4,195,971	+		Psyr_3520	0.57	+1.8
4,195,971	+		Psyr_3520	0.57	+0.2
4,195,971	+		Psyr_3520	0.57	+1.5
4,195,972	-		Psyr_3520	0.57	+1.4
4,196,172	+		Psyr_3520	0.72	-0.7
4,196,172	+		Psyr_3520	0.72	-0.2
4,196,172	+		Psyr_3520	0.72	-0.5
4,196,172	+		Psyr_3520	0.72	+0.4
4,196,172	+		Psyr_3520	0.72	-0.0
4,196,172	+		Psyr_3520	0.72	-0.5
4,196,172	+		Psyr_3520	0.72	-0.3
4,196,172	+		Psyr_3520	0.72	-1.0
4,196,172	+		Psyr_3520	0.72	-1.7
4,196,172	+		Psyr_3520	0.72	+3.8
4,196,172	+		Psyr_3520	0.72	-0.0
4,196,173	-		Psyr_3520	0.73	-1.1
4,196,173	-		Psyr_3520	0.73	-0.5
4,196,173	-		Psyr_3520	0.73	-0.7
4,196,173	-		Psyr_3520	0.73	+0.6
4,196,173	-		Psyr_3520	0.73	-0.7
4,196,173	-		Psyr_3520	0.73	+0.0
4,196,173	-		Psyr_3520	0.73	-1.3
4,196,173	-		Psyr_3520	0.73	-1.6
4,196,173	-		Psyr_3520	0.73	+0.1
4,196,173	-		Psyr_3520	0.73	-0.2
4,196,173	-		Psyr_3520	0.73	-0.5
4,196,495	+				-0.5
4,196,648	+				-0.0
4,196,648	+				-0.3
4,196,648	+				-0.0
4,196,840	+		Psyr_3521	0.30	-1.0
4,196,841	-		Psyr_3521	0.30	-2.7
4,196,864	+		Psyr_3521	0.33	-2.0
4,196,865	-		Psyr_3521	0.33	+0.0
4,196,865	-		Psyr_3521	0.33	-1.0
4,196,865	-		Psyr_3521	0.33	+1.2
4,197,206	+		Psyr_3521	0.71	+0.1
4,197,207	-		Psyr_3521	0.71	-1.4
4,197,500	+				-0.2
4,197,500	+				-1.0
4,197,500	+				-0.2
4,197,501	-				-0.5
4,197,546	-				+1.7
4,197,562	+				-0.7
4,197,609	+				-1.8
4,197,731	+				-0.4
4,197,731	+				+1.4
4,197,732	-				-0.6
4,197,732	-				+0.6
4,197,754	+		Psyr_3522	0.11	+1.4
4,197,754	+		Psyr_3522	0.11	-0.5
4,197,755	-		Psyr_3522	0.11	-0.8
4,197,864	+		Psyr_3522	0.19	-1.1
4,198,030	+		Psyr_3522	0.31	+0.4
4,198,030	+		Psyr_3522	0.31	-1.0
4,198,030	+		Psyr_3522	0.31	+2.4
4,198,030	+		Psyr_3522	0.31	-0.2
4,198,031	-		Psyr_3522	0.31	+3.6
4,198,031	-		Psyr_3522	0.31	+0.1
4,198,031	-		Psyr_3522	0.31	-0.6
4,198,031	-		Psyr_3522	0.31	-1.8
4,198,031	-		Psyr_3522	0.31	+0.6
4,198,115	-		Psyr_3522	0.37	+1.1
4,198,373	+		Psyr_3522	0.56	-2.4
4,198,374	-		Psyr_3522	0.56	-0.2