Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3044

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
3,641,282	+				-0.9
3,641,282	+				-1.3
3,641,282	+				-0.8
3,641,282	+				-0.1
3,641,283	-				-0.6
3,641,283	-				-2.5
3,641,283	-				-0.1
3,641,283	-				-0.5
3,641,284	+				-0.3
3,641,284	+				-0.6
3,641,285	-				-1.5
3,641,285	-				+0.9
3,641,285	-				-2.4
3,641,285	-				-1.9
3,641,464	-				-0.8
3,641,464	-				+0.6
3,641,500	-				-1.9
3,641,530	+				-1.0
3,641,703	+		Psyr_3043	0.25	-1.2
3,641,703	+		Psyr_3043	0.25	-0.4
3,641,703	+		Psyr_3043	0.25	-2.4
3,641,704	-		Psyr_3043	0.25	-1.2
3,641,928	+		Psyr_3043	0.60	-0.2
3,641,928	+		Psyr_3043	0.60	+0.6
3,641,929	-		Psyr_3043	0.60	-1.4
3,641,929	-		Psyr_3043	0.60	-0.1
3,641,929	-		Psyr_3043	0.60	-1.1
3,641,929	-		Psyr_3043	0.60	-1.5
3,642,069	+		Psyr_3043	0.82	+1.2
3,642,235	+				-2.4
3,642,349	+		Psyr_3044	0.28	+0.4
3,642,350	-		Psyr_3044	0.28	-1.0
3,642,350	-		Psyr_3044	0.28	-1.8
3,642,379	+		Psyr_3044	0.33	-1.3
3,642,379	+		Psyr_3044	0.33	-1.5
3,642,379	+		Psyr_3044	0.33	-1.1
3,642,380	-		Psyr_3044	0.33	+1.7
3,642,380	-		Psyr_3044	0.33	-1.5
3,642,380	-		Psyr_3044	0.33	-2.1
3,642,380	-		Psyr_3044	0.33	+0.4
3,642,380	-		Psyr_3044	0.33	+0.9
3,642,380	-		Psyr_3044	0.33	-0.1
3,642,380	-		Psyr_3044	0.33	-2.3
3,642,380	-		Psyr_3044	0.33	-0.9
3,642,380	-		Psyr_3044	0.33	-1.7
3,642,389	+		Psyr_3044	0.34	-0.3
3,642,390	-		Psyr_3044	0.34	-0.6
3,642,390	-		Psyr_3044	0.34	-3.2
3,642,390	-		Psyr_3044	0.34	-0.3
3,642,390	-		Psyr_3044	0.34	+2.9
3,642,797	-				-3.5
3,642,998	+		Psyr_3045	0.13	-0.4
3,642,998	+		Psyr_3045	0.13	-0.2
3,642,998	+		Psyr_3045	0.13	-3.6
3,642,999	-		Psyr_3045	0.13	-1.7
3,642,999	-		Psyr_3045	0.13	-1.3
3,642,999	-		Psyr_3045	0.13	+1.2
3,643,165	-		Psyr_3045	0.23	-1.2
3,643,337	+		Psyr_3045	0.33	+1.7
3,643,337	+		Psyr_3045	0.33	-1.3
3,643,338	-		Psyr_3045	0.33	-1.4
3,643,338	-		Psyr_3045	0.33	-1.9
3,643,439	+		Psyr_3045	0.39	-1.0
3,643,440	-		Psyr_3045	0.39	-0.7
3,643,440	-		Psyr_3045	0.39	-0.1
3,643,440	-		Psyr_3045	0.39	-1.0
3,643,617	+		Psyr_3045	0.50	-3.5
3,643,618	-		Psyr_3045	0.50	-0.9
3,643,618	-		Psyr_3045	0.50	-1.2
3,643,667	+		Psyr_3045	0.53	-0.5
3,643,667	+		Psyr_3045	0.53	-0.1
3,643,667	+		Psyr_3045	0.53	-1.0