Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3020

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
3,614,567	+				+0.5
3,614,568	-		Psyr_3018	0.40	+0.7
3,614,568	-		Psyr_3018	0.40	+1.1
3,614,709	+		Psyr_3018	0.59	+2.5
3,614,709	+		Psyr_3018	0.59	+0.6
3,614,709	+		Psyr_3018	0.59	+2.3
3,614,710	-		Psyr_3018	0.60	+0.3
3,615,470	+				-0.1
3,615,471	-				+0.7
3,615,471	-				-1.7
3,615,471	-				-0.4
3,615,550	+		Psyr_3020	0.12	+0.0
3,615,554	+		Psyr_3020	0.12	-1.7
3,615,869	+		Psyr_3020	0.54	-1.5
3,616,311	+				-1.1
3,616,312	-				+0.7
3,616,312	-				-0.0
3,616,312	-				+0.9
3,616,312	-				-0.9
3,616,312	-				+2.2
3,616,312	-				+0.8
3,616,312	-				-0.5
3,616,404	+				-0.8
3,616,404	+				-0.5
3,616,405	-				-0.4
3,616,506	+				-1.0
3,616,507	-				+1.5
3,616,507	-				-0.8
3,616,507	-				-1.4
3,616,759	-		Psyr_3021	0.13	+0.6
3,616,776	+		Psyr_3021	0.14	+1.0
3,616,788	+		Psyr_3021	0.14	-0.4
3,616,788	+		Psyr_3021	0.14	+0.7
3,616,789	-		Psyr_3021	0.14	+0.9
3,616,789	-		Psyr_3021	0.14	-0.1
3,616,806	+		Psyr_3021	0.15	-0.1
3,616,807	-		Psyr_3021	0.15	-1.1
3,616,807	-		Psyr_3021	0.15	-0.2
3,616,807	-		Psyr_3021	0.15	+0.9
3,616,924	-		Psyr_3021	0.18	+0.5
3,616,945	+		Psyr_3021	0.19	-1.2
3,617,042	-		Psyr_3021	0.21	-0.2