Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3016

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
3,611,767	+		Psyr_3015	0.86	-2.1
3,611,767	+		Psyr_3015	0.86	+0.6
3,611,767	+		Psyr_3015	0.86	-0.7
3,611,768	-		Psyr_3015	0.86	-0.6
3,611,768	-		Psyr_3015	0.86	+2.5
3,611,768	-		Psyr_3015	0.86	-0.2
3,611,845	+		Psyr_3015	0.88	-0.5
3,611,845	+		Psyr_3015	0.88	-1.2
3,611,846	-		Psyr_3015	0.88	+0.4
3,611,846	-		Psyr_3015	0.88	+0.7
3,611,846	-		Psyr_3015	0.88	-1.0
3,611,846	-		Psyr_3015	0.88	-0.4
3,612,091	+				-0.1
3,612,092	-				+0.9
3,612,092	-				-1.6
3,612,092	-				+2.9
3,612,152	-				+0.4
3,612,254	+				-1.7
3,612,254	+				+0.2
3,612,255	-				-0.6
3,612,294	+				-0.6
3,613,163	-		Psyr_3016	0.80	-0.3
3,613,163	-		Psyr_3016	0.80	-2.9
3,613,464	+				-1.3
3,613,550	-				-0.9
3,613,550	-				-0.1
3,613,661	-				-0.4
3,613,876	+				-1.1
3,613,876	+				-0.6
3,613,877	-				-1.3
3,613,877	-				-0.2
3,613,877	-				-0.5
3,613,974	-				+0.7
3,614,185	+		Psyr_3017	0.54	-0.5
3,614,185	+		Psyr_3017	0.54	+1.2
3,614,186	-		Psyr_3017	0.55	-0.3
3,614,297	+				-0.7
3,614,297	+				-0.1
3,614,298	-				+0.6