Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2973

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
3,564,520	-				-0.4
3,564,531	-				+0.2
3,564,550	+				+1.3
3,564,550	+				-0.3
3,564,551	-				-0.3
3,564,551	-				+1.5
3,564,551	-				-1.8
3,564,583	+				-1.5
3,564,583	+				-0.0
3,564,612	+				-0.5
3,564,612	+				+0.8
3,564,620	+				-1.1
3,564,620	+				+0.8
3,564,621	-				-0.2
3,564,621	-				-0.4
3,564,621	-				+1.4
3,564,792	-				-0.9
3,564,792	-				+1.0
3,564,869	-		Psyr_2972	0.15	+1.0
3,565,464	-				-1.2
3,565,464	-				+1.0
3,565,469	+				-0.9
3,565,469	+				+0.2
3,565,470	-				+1.0
3,565,615	+		Psyr_2973	0.24	-1.6
3,565,615	+		Psyr_2973	0.24	+0.2
3,565,616	-		Psyr_2973	0.24	-1.7
3,565,681	+		Psyr_2973	0.36	-1.5
3,565,682	-		Psyr_2973	0.36	-1.0
3,566,001	+				+1.1
3,566,001	+				+0.8
3,566,343	+		Psyr_2974	0.15	-1.3
3,566,344	-		Psyr_2974	0.15	-0.2
3,566,345	-		Psyr_2974	0.15	-0.2
3,566,390	+		Psyr_2974	0.18	+0.1
3,566,583	+		Psyr_2974	0.30	-1.8
3,566,584	-		Psyr_2974	0.31	+1.0
3,566,645	+		Psyr_2974	0.34	+1.0
3,566,646	-		Psyr_2974	0.34	+0.8
3,566,662	-		Psyr_2974	0.36	+2.0
3,566,883	+		Psyr_2974	0.50	-1.1
3,566,883	+		Psyr_2974	0.50	+0.0
3,566,985	-		Psyr_2974	0.56	+0.0
3,566,985	-		Psyr_2974	0.56	+0.2