Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2745

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
3,331,023	+		Psyr_2744	0.61	+0.9
3,331,057	-		Psyr_2744	0.63	-0.2
3,331,326	+		Psyr_2744	0.78	+0.0
3,331,341	+		Psyr_2744	0.79	+1.6
3,331,342	-		Psyr_2744	0.79	-1.6
3,331,433	+		Psyr_2744	0.84	+0.4
3,331,433	+		Psyr_2744	0.84	+1.9
3,331,433	+		Psyr_2744	0.84	-0.8
3,331,434	-		Psyr_2744	0.84	-0.8
3,331,434	-		Psyr_2744	0.84	+1.0
3,331,543	-				-0.5
3,331,919	+				-0.8
3,332,071	+		Psyr_2745	0.17	-0.1
3,332,071	+		Psyr_2745	0.17	+0.1
3,332,071	+		Psyr_2745	0.17	-1.4
3,332,072	-		Psyr_2745	0.17	-0.6
3,332,072	-		Psyr_2745	0.17	-0.9
3,332,075	+		Psyr_2745	0.18	+0.6
3,332,075	+		Psyr_2745	0.18	-0.7
3,332,076	-		Psyr_2745	0.18	-0.3
3,332,076	-		Psyr_2745	0.18	-0.9
3,332,091	+		Psyr_2745	0.18	+0.0
3,332,579	+		Psyr_2745	0.42	-0.2
3,332,580	-		Psyr_2745	0.42	+0.7
3,332,580	-		Psyr_2745	0.42	-0.5
3,332,621	+		Psyr_2745	0.44	-0.4
3,332,621	+		Psyr_2745	0.44	+0.2
3,332,622	-		Psyr_2745	0.44	-0.6
3,332,622	-		Psyr_2745	0.44	-0.2
3,332,622	-		Psyr_2745	0.44	+2.2
3,332,643	+		Psyr_2745	0.45	-1.4
3,332,644	-		Psyr_2745	0.45	+2.6
3,332,876	+		Psyr_2745	0.56	+0.2
3,333,266	+		Psyr_2745	0.75	-0.2
3,333,266	+		Psyr_2745	0.75	-0.2
3,333,266	+		Psyr_2745	0.75	-1.5
3,333,267	-		Psyr_2745	0.75	-1.8
3,333,267	-		Psyr_2745	0.75	-1.0
3,333,345	-		Psyr_2745	0.79	-1.5
3,333,362	+		Psyr_2745	0.80	-0.7
3,333,363	-		Psyr_2745	0.80	+1.2
3,333,464	+		Psyr_2745	0.85	-2.5
3,333,767	+				-0.4
3,333,767	+				+1.2
3,333,767	+				-0.2
3,333,767	+				-1.0
3,333,767	+				+0.9
3,333,767	+				-0.6
3,333,767	+				+0.3
3,333,767	+				-0.8
3,333,767	+				-0.9
3,333,767	+				-0.4
3,333,767	+				+0.1
3,333,768	-				+0.5
3,333,768	-				-0.2
3,333,768	-				+3.2
3,333,768	-				+1.8
3,333,768	-				+1.4
3,333,768	-				+1.0
3,333,768	-				-1.4
3,333,768	-				-0.1
3,333,817	-				+1.3
3,333,926	+		Psyr_2746	0.11	-0.7
3,334,168	+		Psyr_2746	0.30	-0.6
3,334,168	+		Psyr_2746	0.30	+0.0
3,334,168	+		Psyr_2746	0.30	-0.6
3,334,169	-		Psyr_2746	0.30	+0.2
3,334,169	-		Psyr_2746	0.30	-1.4
3,334,175	-		Psyr_2746	0.30	+1.2
3,334,175	-		Psyr_2746	0.30	-0.8
3,334,175	-		Psyr_2746	0.30	+0.2
3,334,213	+		Psyr_2746	0.33	-1.6
3,334,214	-		Psyr_2746	0.33	+1.2
3,334,261	+		Psyr_2746	0.37	-0.9
3,334,261	+		Psyr_2746	0.37	-0.7
3,334,262	-		Psyr_2746	0.37	-0.2
3,334,262	-		Psyr_2746	0.37	-0.2
3,334,324	+		Psyr_2746	0.41	+1.0
3,334,324	+		Psyr_2746	0.41	+1.1
3,334,324	+		Psyr_2746	0.41	-0.1
3,334,651	-		Psyr_2746	0.66	-1.3
3,334,731	+		Psyr_2746	0.72	-0.2
3,334,731	+		Psyr_2746	0.72	-0.6
3,334,757	-		Psyr_2746	0.74	-0.5