Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2566

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,978,686	-		Psyr_2564	0.74	+1.0
2,978,703	-		Psyr_2564	0.77	+0.2
2,978,764	+		Psyr_2564	0.85	+3.5
2,978,765	-		Psyr_2564	0.85	+0.0
2,978,765	-		Psyr_2564	0.85	-0.2
2,978,891	-				-0.2
2,978,892	+				-1.0
2,978,893	-				-1.1
2,978,990	-				-0.1
2,979,108	+		Psyr_2565	0.18	-0.3
2,979,479	+		Psyr_2565	0.74	-0.9
2,979,770	-		Psyr_2566	0.12	-0.8
2,979,770	-		Psyr_2566	0.12	-0.0
2,979,770	-		Psyr_2566	0.12	-1.0
2,979,770	-		Psyr_2566	0.12	-1.4
2,979,770	-		Psyr_2566	0.12	-0.0
2,979,781	+		Psyr_2566	0.13	+0.1
2,979,781	+		Psyr_2566	0.13	+2.1
2,979,782	-		Psyr_2566	0.13	-1.3
2,979,891	+		Psyr_2566	0.24	-0.3
2,980,563	-				+2.7
2,980,682	-				-0.5
2,980,726	-				-0.4
2,980,848	-		Psyr_2567	0.14	-0.3
2,980,848	-		Psyr_2567	0.14	+0.2
2,981,011	+		Psyr_2567	0.28	+0.7
2,981,011	+		Psyr_2567	0.28	-0.6
2,981,011	+		Psyr_2567	0.28	-3.0
2,981,011	+		Psyr_2567	0.28	-1.9
2,981,011	+		Psyr_2567	0.28	+0.6
2,981,011	+		Psyr_2567	0.28	-1.9
2,981,011	+		Psyr_2567	0.28	-2.5
2,981,011	+		Psyr_2567	0.28	-1.9
2,981,012	-		Psyr_2567	0.28	-0.5
2,981,015	+		Psyr_2567	0.29	+0.8
2,981,015	+		Psyr_2567	0.29	-1.0
2,981,015	+		Psyr_2567	0.29	+0.6
2,981,015	+		Psyr_2567	0.29	-0.8
2,981,015	+		Psyr_2567	0.29	-0.3
2,981,015	+		Psyr_2567	0.29	-0.3
2,981,015	+		Psyr_2567	0.29	+2.5
2,981,015	+		Psyr_2567	0.29	-0.2
2,981,015	+		Psyr_2567	0.29	-0.8
2,981,015	+		Psyr_2567	0.29	-1.5
2,981,015	+		Psyr_2567	0.29	-0.9
2,981,016	-		Psyr_2567	0.29	-0.9
2,981,016	-		Psyr_2567	0.29	-0.2
2,981,016	-		Psyr_2567	0.29	+0.1
2,981,016	-		Psyr_2567	0.29	+2.4
2,981,016	-		Psyr_2567	0.29	-2.0
2,981,016	-		Psyr_2567	0.29	+3.1
2,981,016	-		Psyr_2567	0.29	+1.1
2,981,016	-		Psyr_2567	0.29	+0.4
2,981,016	-		Psyr_2567	0.29	+0.4
2,981,016	-		Psyr_2567	0.29	+1.0
2,981,358	-		Psyr_2567	0.59	+0.2
2,981,358	-		Psyr_2567	0.59	+0.7
2,981,397	-		Psyr_2567	0.63	-0.8
2,981,624	+		Psyr_2567	0.83	+1.1
2,981,625	-		Psyr_2567	0.83	-0.6