Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2536

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,949,745	-		Psyr_2535	0.17	-1.2
2,949,759	+		Psyr_2535	0.18	-0.7
2,949,760	-		Psyr_2535	0.18	+0.5
2,949,760	-		Psyr_2535	0.18	-2.3
2,949,873	+		Psyr_2535	0.29	-1.7
2,949,874	-		Psyr_2535	0.29	-1.0
2,949,878	-		Psyr_2535	0.30	+2.3
2,949,878	-		Psyr_2535	0.30	-0.3
2,950,051	+		Psyr_2535	0.46	+0.9
2,950,052	-		Psyr_2535	0.46	-0.3
2,950,052	-		Psyr_2535	0.46	+1.1
2,950,097	-				+2.1
2,950,437	-		Psyr_2535	0.83	-0.7
2,950,437	-		Psyr_2535	0.83	+0.9
2,950,572	+				+0.8
2,950,572	+				-1.0
2,950,572	+				+0.4
2,950,572	+				-0.3
2,950,572	+				-1.6
2,950,572	+				-1.5
2,950,572	+				+0.4
2,950,572	+				-0.7
2,950,572	+				+0.8
2,950,573	-				+0.5
2,950,573	-				+0.6
2,950,573	-				-0.4
2,950,573	-				-3.7
2,950,573	-				-0.6
2,950,573	-				-1.0
2,950,575	-				+1.5
2,950,652	+				+1.1
2,950,726	+				-0.7
2,950,919	+		Psyr_2536	0.23	-0.3
2,950,919	+		Psyr_2536	0.23	+0.9
2,950,920	-		Psyr_2536	0.23	-0.6
2,950,920	-		Psyr_2536	0.23	-0.1
2,950,920	-		Psyr_2536	0.23	+0.7
2,950,920	-		Psyr_2536	0.23	-2.1
2,951,392	+		Psyr_2536	0.71	+2.7
2,951,392	+		Psyr_2536	0.71	-0.6
2,951,392	+		Psyr_2536	0.71	+1.0
2,951,392	+		Psyr_2536	0.71	-0.1
2,951,392	+		Psyr_2536	0.71	+0.3
2,951,393	-		Psyr_2536	0.71	+1.6
2,951,666	+				+1.5
2,951,666	+				+0.5
2,951,667	-				-2.2
2,951,667	-				+2.1
2,951,667	-				-0.9
2,951,667	-				+0.9
2,951,675	+				-0.4
2,951,690	+				+1.3
2,951,800	-				+0.1
2,951,884	+				-0.4
2,952,401	+		Psyr_2537	0.28	+3.7
2,952,439	-		Psyr_2537	0.30	+0.1
2,952,439	-		Psyr_2537	0.30	+3.4
2,952,454	+		Psyr_2537	0.31	-0.0
2,952,455	-		Psyr_2537	0.31	+0.1