Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2383

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,760,953	+		Psyr_2381	0.72	+1.0
2,760,954	-		Psyr_2381	0.72	+1.0
2,760,954	-		Psyr_2381	0.72	+0.4
2,760,954	-		Psyr_2381	0.72	+1.3
2,760,958	+		Psyr_2381	0.73	-0.8
2,761,284	+				+0.2
2,761,285	-				+0.0
2,761,322	-				+1.2
2,761,322	-				-0.7
2,761,374	+				+2.6
2,761,374	+				-0.4
2,761,375	-				-0.8
2,761,375	-				+0.3
2,761,417	+				+1.0
2,761,417	+				+3.2
2,761,450	-		Psyr_2382	0.15	-0.6
2,761,613	+		Psyr_2382	0.53	+0.6
2,761,613	+		Psyr_2382	0.53	-0.4
2,761,613	+		Psyr_2382	0.53	+0.4
2,761,613	+		Psyr_2382	0.53	+0.7
2,761,613	+		Psyr_2382	0.53	+0.8
2,761,613	+		Psyr_2382	0.53	-0.5
2,761,613	+		Psyr_2382	0.53	-0.2
2,761,614	-		Psyr_2382	0.53	-0.1
2,761,614	-		Psyr_2382	0.53	+0.6
2,761,614	-		Psyr_2382	0.53	-0.6
2,761,614	-		Psyr_2382	0.53	+0.4
2,761,614	-		Psyr_2382	0.53	+1.2
2,761,614	-		Psyr_2382	0.53	+1.3
2,761,614	-		Psyr_2382	0.53	+0.0
2,761,614	-		Psyr_2382	0.53	-0.0
2,761,614	-		Psyr_2382	0.53	-0.7
2,761,692	+		Psyr_2382	0.71	-1.5
2,761,692	+		Psyr_2382	0.71	-0.9
2,761,692	+		Psyr_2382	0.71	+1.8
2,761,692	+		Psyr_2382	0.71	+0.4
2,761,693	-		Psyr_2382	0.71	-0.7
2,761,693	-		Psyr_2382	0.71	-2.2
2,761,782	+				-0.9
2,761,783	-				+2.8
2,761,811	+				+2.4
2,761,811	+				+0.0
2,761,812	-				-0.1
2,761,812	-				-0.1
2,761,832	-				+2.0
2,761,832	-				+1.0
2,761,867	+				-0.3
2,761,909	+		Psyr_2383	0.12	-0.7
2,761,910	-		Psyr_2383	0.12	-0.2
2,761,975	+		Psyr_2383	0.21	-1.5
2,762,354	-		Psyr_2383	0.73	-0.1
2,762,396	-		Psyr_2383	0.79	-2.4
2,762,554	+				+0.3
2,762,554	+				-0.2
2,762,554	+				-1.1
2,762,554	+				+1.2
2,762,554	+				+1.3
2,762,555	-				+0.5
2,762,785	-		Psyr_2384	0.55	+0.6
2,762,953	+				+1.3
2,762,953	+				-0.8
2,762,954	-				-0.3