Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2317

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,692,256	+		Psyr_2315	0.80	+1.3
2,692,256	+		Psyr_2315	0.80	+2.6
2,692,257	-		Psyr_2315	0.80	-1.0
2,692,288	-		Psyr_2315	0.82	-2.4
2,692,635	+				+2.7
2,692,636	-				+0.8
2,692,768	+				+1.0
2,692,768	+				-0.1
2,692,769	-				+0.6
2,692,769	-				+1.0
2,692,781	-				+0.0
2,692,790	+				-1.3
2,692,790	+				-1.6
2,692,790	+				-0.1
2,692,791	-				-0.7
2,693,189	+		Psyr_2316	0.89	-1.2
2,693,484	+		Psyr_2317	0.49	+1.4
2,693,513	+		Psyr_2317	0.54	+1.8
2,693,514	-		Psyr_2317	0.54	+4.2
2,693,514	-		Psyr_2317	0.54	-1.2
2,693,514	-		Psyr_2317	0.54	+0.7
2,693,514	-		Psyr_2317	0.54	+0.8
2,693,546	+		Psyr_2317	0.61	-0.7
2,693,626	-		Psyr_2317	0.76	-2.3
2,693,720	+				+0.1
2,693,720	+				-0.4
2,693,720	+				+0.0
2,693,721	-				-1.4
2,693,721	-				+0.4
2,693,721	-				-1.0
2,693,721	-				-2.4
2,693,750	+				-0.1
2,693,751	-				-0.6
2,693,893	+		Psyr_2318	0.62	+1.8
2,693,951	+		Psyr_2318	0.88	+1.0
2,693,951	+		Psyr_2318	0.88	-0.1
2,693,951	+		Psyr_2318	0.88	-0.2
2,693,952	-		Psyr_2318	0.88	-1.4
2,693,953	+		Psyr_2318	0.89	+0.3
2,693,953	+		Psyr_2318	0.89	+1.2
2,693,954	-		Psyr_2318	0.89	-0.6
2,693,999	+				-1.2
2,693,999	+				-1.4
2,694,002	+				-1.9
2,694,446	+				+0.6
2,694,446	+				+1.1
2,694,446	+				-0.4
2,694,447	-				-1.2
2,694,467	+				-0.4
2,694,467	+				-1.8
2,694,468	-				+0.2
2,694,468	-				+1.2
2,694,468	-				+0.7
2,694,468	-				+0.3
2,694,468	-				-1.1
2,694,567	-				+1.0
2,694,570	-				-0.9
2,694,570	-				+1.2
2,694,570	-				-0.2
2,694,597	+				+1.4
2,694,608	+				-0.8
2,694,622	-				+0.6
2,694,624	+				+0.2
2,694,624	+				+0.1
2,694,624	+				-0.2
2,694,625	-				-0.1
2,694,713	-				-0.6
2,694,740	+				-2.2
2,694,741	-				-0.2
2,694,744	+				-2.0