Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2300

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,672,540	-		Psyr_2299	0.40	+1.3
2,672,711	+		Psyr_2299	0.52	-1.5
2,672,712	-		Psyr_2299	0.52	-0.3
2,672,712	-		Psyr_2299	0.52	+0.4
2,672,816	-		Psyr_2299	0.60	-1.3
2,672,816	-		Psyr_2299	0.60	+1.1
2,672,849	+		Psyr_2299	0.62	+1.0
2,672,849	+		Psyr_2299	0.62	-0.1
2,672,909	-		Psyr_2299	0.66	-0.8
2,672,963	+		Psyr_2299	0.70	+0.8
2,672,972	+		Psyr_2299	0.71	+0.7
2,673,005	+		Psyr_2299	0.73	+1.3
2,673,005	+		Psyr_2299	0.73	-0.8
2,673,005	+		Psyr_2299	0.73	-0.2
2,673,196	-		Psyr_2299	0.86	+0.1
2,673,361	-				+0.4
2,673,479	+				+1.8
2,673,537	+				-0.8
2,673,670	+		Psyr_2300	0.23	-0.5
2,673,674	+		Psyr_2300	0.24	-1.4
2,673,674	+		Psyr_2300	0.24	-0.5
2,673,678	+		Psyr_2300	0.24	-0.2
2,673,678	+		Psyr_2300	0.24	+0.0
2,673,849	-		Psyr_2300	0.42	-1.6
2,674,150	+		Psyr_2300	0.73	+2.0
2,674,150	+		Psyr_2300	0.73	-0.8
2,674,201	+		Psyr_2300	0.78	+0.2
2,674,201	+		Psyr_2300	0.78	-0.4
2,674,337	-				+1.3
2,674,622	+		Psyr_2301	0.29	-0.2
2,674,623	-		Psyr_2301	0.29	-0.2
2,674,623	-		Psyr_2301	0.29	+1.9
2,674,623	-		Psyr_2301	0.29	+0.4
2,674,623	-		Psyr_2301	0.29	+0.0
2,674,629	-		Psyr_2301	0.30	+0.3
2,674,704	+		Psyr_2301	0.40	+1.5
2,674,705	-		Psyr_2301	0.40	-0.9
2,674,983	+		Psyr_2301	0.77	-0.5
2,674,983	+		Psyr_2301	0.77	-1.2
2,674,984	-		Psyr_2301	0.78	+0.0
2,674,984	-		Psyr_2301	0.78	+0.0
2,674,984	-		Psyr_2301	0.78	-0.4
2,674,991	+		Psyr_2301	0.79	+1.4
2,674,991	+		Psyr_2301	0.79	+1.0
2,674,991	+		Psyr_2301	0.79	+2.0
2,674,992	-		Psyr_2301	0.79	-0.6
2,674,992	-		Psyr_2301	0.79	-0.4
2,674,992	-		Psyr_2301	0.79	+1.8
2,674,992	-		Psyr_2301	0.79	-0.6
2,675,123	-				+1.2
2,675,123	-				+0.9