Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2205

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,560,805	-		Psyr_2204	0.12	-0.3
2,561,311	+		Psyr_2204	0.68	+0.7
2,561,311	+		Psyr_2204	0.68	-0.6
2,561,312	-		Psyr_2204	0.68	+0.5
2,561,343	+		Psyr_2204	0.71	+0.6
2,561,395	+		Psyr_2204	0.77	+0.7
2,561,396	-		Psyr_2204	0.77	-2.3
2,561,446	+		Psyr_2204	0.83	-0.2
2,561,446	+		Psyr_2204	0.83	+0.4
2,561,446	+		Psyr_2204	0.83	+0.6
2,561,446	+		Psyr_2204	0.83	+3.0
2,561,447	-		Psyr_2204	0.83	-1.0
2,561,455	+		Psyr_2204	0.83	+0.4
2,561,455	+		Psyr_2204	0.83	+1.3
2,561,455	+		Psyr_2204	0.83	-0.6
2,561,455	+		Psyr_2204	0.83	-0.5
2,561,455	+		Psyr_2204	0.83	-0.2
2,561,455	+		Psyr_2204	0.83	-0.3
2,561,456	-		Psyr_2204	0.84	+1.0
2,561,456	-		Psyr_2204	0.84	-0.6
2,561,456	-		Psyr_2204	0.84	-0.2
2,561,456	-		Psyr_2204	0.84	-1.0
2,561,456	-		Psyr_2204	0.84	-1.0
2,561,456	-		Psyr_2204	0.84	-0.4
2,561,456	-		Psyr_2204	0.84	+2.0
2,561,584	-				+0.7
2,561,713	+				+0.2
2,561,713	+				+0.1
2,561,896	+		Psyr_2205	0.19	+1.2
2,561,896	+		Psyr_2205	0.19	+0.1
2,561,896	+		Psyr_2205	0.19	+0.2
2,561,897	-		Psyr_2205	0.19	+0.0
2,561,897	-		Psyr_2205	0.19	+1.6
2,561,908	+		Psyr_2205	0.20	-0.3
2,561,908	+		Psyr_2205	0.20	-0.9
2,561,909	-		Psyr_2205	0.20	+0.9
2,561,909	-		Psyr_2205	0.20	-0.7
2,561,909	-		Psyr_2205	0.20	+1.0
2,562,011	-		Psyr_2205	0.29	-0.2
2,562,011	-		Psyr_2205	0.29	+0.4
2,562,011	-		Psyr_2205	0.29	+0.2
2,562,136	+		Psyr_2205	0.39	-0.6
2,562,136	+		Psyr_2205	0.39	+1.7
2,562,144	+		Psyr_2205	0.40	+2.2
2,562,244	+		Psyr_2205	0.49	+0.1
2,562,322	+		Psyr_2205	0.55	+1.0
2,562,323	-		Psyr_2205	0.55	+0.3
2,562,340	+		Psyr_2205	0.57	+3.6
2,562,340	+		Psyr_2205	0.57	-0.3
2,562,420	-		Psyr_2205	0.63	-2.2
2,562,448	+		Psyr_2205	0.66	+0.0
2,562,449	-		Psyr_2205	0.66	+0.4
2,562,449	-		Psyr_2205	0.66	-0.6
2,562,449	-		Psyr_2205	0.66	+1.0
2,562,449	-		Psyr_2205	0.66	-0.1
2,562,463	+		Psyr_2205	0.67	+0.5
2,562,464	-		Psyr_2205	0.67	+1.5
2,562,857	+				-0.5
2,562,858	-				+1.5
2,563,034	-				+1.8
2,563,109	-				+1.0
2,563,158	+				-0.2
2,563,158	+				-0.9
2,563,158	+				-1.5
2,563,159	-				+0.0
2,563,201	+				+0.6
2,563,205	+				+1.0
2,563,205	+				-1.7
2,563,205	+				-1.4
2,563,206	-				+2.0
2,563,206	-				+3.3
2,563,215	+				+1.7
2,563,215	+				+0.2
2,563,216	-				+1.0
2,563,216	-				-0.2
2,563,216	-				+0.4
2,563,216	-				+1.0
2,563,225	+				+0.6
2,563,226	-				+1.0
2,563,575	+				-0.1
2,563,575	+				-0.6
2,563,576	-				+0.3
2,563,576	-				+0.1
2,563,602	+				-0.3
2,563,603	-				-0.6
2,563,603	-				+0.0
2,563,622	-				-0.2