Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2173

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,525,671	+		Psyr_2172	0.27	-0.0
2,525,671	+		Psyr_2172	0.27	-1.3
2,525,671	+		Psyr_2172	0.27	+0.1
2,525,671	+		Psyr_2172	0.27	-0.3
2,525,672	-		Psyr_2172	0.27	-0.5
2,525,672	-		Psyr_2172	0.27	+1.0
2,525,672	-		Psyr_2172	0.27	+0.3
2,525,672	-		Psyr_2172	0.27	-0.8
2,525,708	+		Psyr_2172	0.31	+0.1
2,525,708	+		Psyr_2172	0.31	+2.0
2,525,709	-		Psyr_2172	0.31	+1.0
2,525,709	-		Psyr_2172	0.31	+0.9
2,525,709	-		Psyr_2172	0.31	-0.3
2,525,720	+		Psyr_2172	0.33	+0.5
2,525,721	-		Psyr_2172	0.33	+0.3
2,525,727	+		Psyr_2172	0.34	-0.2
2,525,728	-		Psyr_2172	0.34	-0.2
2,525,728	-		Psyr_2172	0.34	+0.4
2,525,915	-				-0.6
2,525,929	+		Psyr_2172	0.57	-0.8
2,525,978	-		Psyr_2172	0.63	-1.9
2,526,004	+		Psyr_2172	0.66	-0.4
2,526,004	+		Psyr_2172	0.66	-0.7
2,526,288	+				-1.0
2,526,288	+				-0.6
2,526,288	+				+1.0
2,526,288	+				+1.9
2,526,470	-		Psyr_2173	0.17	+1.3
2,526,483	+		Psyr_2173	0.18	+0.1
2,526,483	+		Psyr_2173	0.18	+0.2
2,526,483	+		Psyr_2173	0.18	-0.6
2,526,483	+		Psyr_2173	0.18	-0.2
2,526,483	+		Psyr_2173	0.18	+2.6
2,526,483	+		Psyr_2173	0.18	-0.5
2,526,484	-		Psyr_2173	0.18	+0.2
2,526,484	-		Psyr_2173	0.18	+0.2
2,526,484	-		Psyr_2173	0.18	-1.7
2,526,484	-		Psyr_2173	0.18	+0.7
2,526,484	-		Psyr_2173	0.18	+0.1
2,526,484	-		Psyr_2173	0.18	+1.0
2,526,484	-		Psyr_2173	0.18	+0.8
2,526,841	+		Psyr_2173	0.57	-1.4
2,526,841	+		Psyr_2173	0.57	+0.2
2,526,862	-		Psyr_2173	0.59	-1.9
2,526,862	-		Psyr_2173	0.59	+0.2
2,526,993	+		Psyr_2173	0.73	+0.5
2,527,014	-		Psyr_2173	0.75	+2.1
2,527,246	-				+0.4
2,527,251	-				+1.0
2,527,251	-				+0.4
2,527,441	-		Psyr_2174	0.26	+1.4
2,527,956	+				-0.0
2,527,956	+				-0.1
2,527,956	+				-1.8
2,527,956	+				-1.7
2,528,058	+				+1.9
2,528,098	+				+0.1
2,528,141	+				+0.3
2,528,161	+				-0.5
2,528,161	+				+1.0
2,528,162	-				+0.1
2,528,162	-				+0.0
2,528,162	-				+2.0
2,528,162	-				+1.2
2,528,162	-				-0.9
2,528,162	-				+0.0
2,528,162	-				-0.4
2,528,162	-				+0.1
2,528,196	-		Psyr_2175	0.11	-0.1
2,528,196	-		Psyr_2175	0.11	+0.4