Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2098

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,445,462	+		Psyr_2097	0.72	-1.9
2,445,558	+		Psyr_2097	0.81	-0.1
2,445,618	+		Psyr_2097	0.87	-2.2
2,445,747	+				-1.9
2,445,748	-				-3.2
2,445,748	-				-0.3
2,445,895	+				+1.4
2,445,896	-				+0.0
2,446,099	+		Psyr_2098	0.34	-1.4
2,446,099	+		Psyr_2098	0.34	-1.3
2,446,099	+		Psyr_2098	0.34	+0.1
2,446,100	-		Psyr_2098	0.35	-0.7
2,446,100	-		Psyr_2098	0.35	+3.3
2,446,194	+		Psyr_2098	0.47	-0.7
2,446,194	+		Psyr_2098	0.47	+0.2
2,446,194	+		Psyr_2098	0.47	-0.6
2,446,195	-		Psyr_2098	0.47	-1.7
2,446,195	-		Psyr_2098	0.47	-1.6
2,446,197	-		Psyr_2098	0.47	-0.3
2,446,251	-		Psyr_2098	0.54	-0.7
2,446,251	-		Psyr_2098	0.54	+0.0
2,446,376	-		Psyr_2098	0.71	-1.1
2,446,584	+				-0.9
2,446,584	+				-1.7
2,446,584	+				+0.6
2,446,584	+				-0.4
2,446,585	-				+0.3
2,446,585	-				-1.7
2,446,585	-				-0.8
2,446,645	+				-0.5
2,446,646	-				-0.3
2,446,646	-				+1.5
2,446,926	+		Psyr_2099	0.12	-0.1
2,446,926	+		Psyr_2099	0.12	+0.7
2,446,927	-		Psyr_2099	0.12	-1.0
2,446,927	-		Psyr_2099	0.12	-1.3
2,446,979	+		Psyr_2099	0.14	+0.2
2,447,011	+		Psyr_2099	0.15	-0.9
2,447,072	-		Psyr_2099	0.17	-1.8
2,447,114	+		Psyr_2099	0.19	-1.0
2,447,114	+		Psyr_2099	0.19	-1.2
2,447,115	-		Psyr_2099	0.19	-1.3
2,447,591	+		Psyr_2099	0.36	+0.2
2,447,591	+		Psyr_2099	0.36	+1.4
2,447,591	+		Psyr_2099	0.36	+0.3
2,447,591	+		Psyr_2099	0.36	-1.2
2,447,592	-		Psyr_2099	0.36	+0.2
2,447,592	-		Psyr_2099	0.36	-1.0
2,447,592	-		Psyr_2099	0.36	+0.3