Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2085

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,429,445	+				+1.4
2,429,445	+				-0.1
2,429,509	+				+0.4
2,429,509	+				+0.7
2,429,509	+				+2.1
2,429,510	-				+0.4
2,429,510	-				-1.4
2,429,510	-				-2.3
2,429,510	-				+1.7
2,429,636	+				-1.2
2,429,636	+				+0.5
2,429,636	+				+0.2
2,429,636	+				-0.2
2,429,636	+				+1.1
2,429,636	+				+0.0
2,429,636	+				+1.4
2,429,636	+				-0.3
2,429,636	+				+1.3
2,429,636	+				-0.2
2,429,636	+				+0.3
2,429,636	+				+0.7
2,429,636	+				-0.7
2,429,636	+				-1.2
2,429,636	+				+0.4
2,429,637	-				-0.5
2,429,637	-				-0.1
2,429,637	-				+0.2
2,429,637	-				-1.0
2,429,637	-				+0.3
2,429,751	+		Psyr_2084	0.10	-0.1
2,429,751	+		Psyr_2084	0.10	+1.2
2,429,752	-		Psyr_2084	0.10	-0.8
2,429,825	-		Psyr_2084	0.21	-0.1
2,429,825	-		Psyr_2084	0.21	-0.5
2,429,825	-		Psyr_2084	0.21	+0.5
2,430,079	-		Psyr_2084	0.56	-1.0
2,430,197	-		Psyr_2084	0.72	-2.1
2,430,440	+				+1.3
2,430,521	+		Psyr_2085	0.14	-0.4
2,430,522	-		Psyr_2085	0.14	-0.9
2,430,525	+		Psyr_2085	0.15	-0.1
2,430,525	+		Psyr_2085	0.15	-1.4
2,430,525	+		Psyr_2085	0.15	-0.7
2,430,525	+		Psyr_2085	0.15	-1.0
2,430,525	+		Psyr_2085	0.15	+0.1
2,430,526	-		Psyr_2085	0.15	-0.1
2,430,526	-		Psyr_2085	0.15	-1.7
2,430,598	+		Psyr_2085	0.23	+0.8
2,430,599	-		Psyr_2085	0.23	-0.4
2,430,599	-		Psyr_2085	0.23	-2.3
2,430,930	-		Psyr_2085	0.60	-0.2
2,430,948	-		Psyr_2085	0.62	-0.5
2,430,984	+		Psyr_2085	0.66	+0.4
2,430,984	+		Psyr_2085	0.66	-0.8
2,430,984	+		Psyr_2085	0.66	+0.9
2,430,985	-		Psyr_2085	0.66	-1.3
2,431,059	-		Psyr_2085	0.74	+0.4
2,431,218	+				+1.9
2,431,219	-				-0.4
2,431,219	-				+0.9
2,431,352	+				-0.4
2,431,352	+				+1.7
2,431,353	-				+2.5
2,431,382	+				+0.5
2,431,462	+				+0.6
2,431,545	+				-1.1
2,431,602	+		Psyr_2086	0.14	+1.7
2,431,650	+		Psyr_2086	0.18	-0.8
2,431,650	+		Psyr_2086	0.18	-0.6
2,431,650	+		Psyr_2086	0.18	-0.3
2,431,650	+		Psyr_2086	0.18	+0.8
2,431,650	+		Psyr_2086	0.18	+0.1
2,431,650	+		Psyr_2086	0.18	+0.2
2,431,651	-		Psyr_2086	0.18	+1.4
2,431,651	-		Psyr_2086	0.18	-0.2
2,431,651	-		Psyr_2086	0.18	+0.5
2,431,651	-		Psyr_2086	0.18	-1.2
2,431,651	-		Psyr_2086	0.18	-0.6
2,431,651	-		Psyr_2086	0.18	-0.5
2,431,653	-		Psyr_2086	0.18	-0.6
2,432,065	-		Psyr_2086	0.55	+0.0
2,432,236	-		Psyr_2086	0.70	-0.6