Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1839

Experiment: KB with Avocatin B 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin B 10 mM
2,118,416	+				+0.5
2,118,416	+				+1.6
2,118,722	-		Psyr_1838	0.29	-3.5
2,119,488	-				-0.1
2,119,717	+		Psyr_1839	0.25	+0.3
2,119,717	+		Psyr_1839	0.25	+0.2
2,119,717	+		Psyr_1839	0.25	-1.3
2,119,718	-		Psyr_1839	0.25	+1.5
2,119,719	+		Psyr_1839	0.25	-0.3
2,119,720	-		Psyr_1839	0.26	-0.6
2,119,855	+		Psyr_1839	0.37	+1.3
2,120,109	+		Psyr_1839	0.58	+2.5
2,120,109	+		Psyr_1839	0.58	+0.6
2,120,110	-		Psyr_1839	0.58	-0.6
2,120,110	-		Psyr_1839	0.58	-0.5
2,120,635	+				+0.5
2,120,655	-				+0.9
2,120,681	+				-0.8
2,120,682	-				+0.1
2,121,076	+		Psyr_1840	0.75	-0.2
2,121,076	+		Psyr_1840	0.75	+0.2
2,121,271	-				+1.6
2,121,271	-				+0.9
2,121,271	-				+0.9
2,121,578	+		Psyr_1841	0.26	+0.6
2,121,578	+		Psyr_1841	0.26	+0.3
2,121,578	+		Psyr_1841	0.26	-0.1
2,121,578	+		Psyr_1841	0.26	-1.4
2,121,579	-		Psyr_1841	0.26	-1.7