Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3584

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
4,637,425	+		BT3583	0.25	-0.1
4,637,466	+		BT3583	0.28	+0.9
4,637,467	-		BT3583	0.28	+0.7
4,637,470	-		BT3583	0.28	-0.7
4,637,470	-		BT3583	0.28	-1.4
4,637,474	-		BT3583	0.29	-2.1
4,637,491	+		BT3583	0.30	-1.1
4,637,494	+		BT3583	0.30	-1.2
4,637,524	+		BT3583	0.33	-3.1
4,637,537	-		BT3583	0.33	-0.1
4,637,581	-		BT3583	0.37	-0.5
4,637,586	+		BT3583	0.37	-1.3
4,637,603	-		BT3583	0.38	-1.7
4,637,607	+		BT3583	0.39	-1.7
4,637,610	-		BT3583	0.39	+1.9
4,637,883	+		BT3583	0.60	-0.5
4,637,884	-		BT3583	0.60	-1.5
4,637,896	-		BT3583	0.61	-0.1
4,637,899	+		BT3583	0.61	+1.5
4,637,949	+		BT3583	0.65	-2.1
4,637,949	+		BT3583	0.65	-0.1
4,637,949	+		BT3583	0.65	-0.1
4,637,949	+		BT3583	0.65	-2.4
4,637,950	-		BT3583	0.65	+1.2
4,637,950	-		BT3583	0.65	-0.4
4,637,952	-		BT3583	0.65	-1.7
4,637,952	-		BT3583	0.65	-0.1
4,637,952	-		BT3583	0.65	+0.1
4,637,952	-		BT3583	0.65	-0.1
4,637,953	+		BT3583	0.65	-1.7
4,637,954	-		BT3583	0.65	-1.2
4,637,970	-		BT3583	0.66	-1.5
4,637,999	+		BT3583	0.68	+0.5
4,638,000	-		BT3583	0.68	-0.9
4,638,000	-		BT3583	0.68	-0.2
4,638,069	-		BT3583	0.74	-1.6
4,638,080	-		BT3583	0.74	+1.1
4,638,134	+		BT3583	0.79	-0.6
4,638,135	-		BT3583	0.79	-2.3
4,638,166	-		BT3583	0.81	-1.1
4,638,225	+		BT3583	0.85	-1.1
4,638,225	+		BT3583	0.85	-1.5
4,638,225	+		BT3583	0.85	-0.1
4,638,225	+		BT3583	0.85	-0.1
4,638,225	+				-2.1
4,638,245	-		BT3583	0.87	+0.9
4,638,352	+				+0.7
4,638,352	+				-1.9
4,638,354	+				+1.5
4,638,428	+				-1.1
4,638,430	+				-2.2
4,638,431	-				+1.9
4,638,431	-				-0.4
4,638,432	+				-3.4
4,638,433	-				-3.1
4,638,433	-				-2.4
4,638,434	+				-1.3
4,638,434	+				-2.4
4,638,513	+		BT3584	0.12	-0.2
4,638,513	+		BT3584	0.12	-0.1
4,638,514	-		BT3584	0.13	-1.1
4,638,596	+		BT3584	0.24	-0.1
4,638,607	+		BT3584	0.25	-1.0
4,638,617	+		BT3584	0.26	-0.1
4,638,638	+		BT3584	0.29	-1.3
4,638,679	+		BT3584	0.35	-0.1
4,638,716	-		BT3584	0.40	-1.2
4,638,774	+		BT3584	0.48	-2.4
4,638,777	-		BT3584	0.48	-0.7
4,638,864	-		BT3584	0.60	-0.3
4,638,873	-		BT3584	0.61	-0.8
4,638,967	-		BT3584	0.74	-1.7
4,638,972	-		BT3584	0.74	-0.2
4,639,013	+		BT3584	0.80	+1.1
4,639,014	-		BT3584	0.80	-0.6
4,639,023	+		BT3584	0.81	+0.3
4,639,032	+		BT3584	0.82	+0.2
4,639,080	+		BT3584	0.89	+0.6
4,639,095	-				-0.4
4,639,095	-				-1.1
4,639,095	-				+2.2
4,639,113	+				+0.9
4,639,164	-				-1.2
4,639,247	+				+1.3
4,639,278	+				-0.4
4,639,287	+				+0.1
4,639,288	-				-1.1
4,639,289	+				-1.3
4,639,293	-				+0.3
4,639,297	-				-1.8
4,639,336	-				+1.5
4,639,366	+				+0.9
4,639,366	+				+1.5
4,639,367	-				-0.2
4,639,593	+		BT3585	0.25	-0.9
4,639,600	-		BT3585	0.25	-3.8
4,639,600	-		BT3585	0.25	+1.5
4,639,600	-		BT3585	0.25	-0.8
4,639,600	-		BT3585	0.25	-2.1
4,639,612	-		BT3585	0.26	-1.4
4,639,653	-		BT3585	0.29	-0.1
4,639,653	-		BT3585	0.29	-0.1
4,639,676	-		BT3585	0.31	-2.7
4,639,677	+		BT3585	0.31	-0.2
4,639,678	-		BT3585	0.31	+2.5
4,639,678	-		BT3585	0.31	-0.5
4,639,690	+				-0.1
4,639,691	-		BT3585	0.32	+0.9
4,639,703	-		BT3585	0.32	-2.0
4,639,707	+		BT3585	0.33	-1.2
4,639,734	+		BT3585	0.35	-2.6
4,639,734	+		BT3585	0.35	-2.3
4,639,735	-		BT3585	0.35	-1.1
4,639,738	-		BT3585	0.35	-0.8
4,639,744	-		BT3585	0.35	+0.5
4,639,744	-		BT3585	0.35	-0.4
4,639,745	+		BT3585	0.35	-0.9
4,639,745	+		BT3585	0.35	-0.1
4,639,801	+		BT3585	0.39	+0.7
4,639,802	-		BT3585	0.40	+1.5
4,639,807	-		BT3585	0.40	-0.1
4,639,837	+		BT3585	0.42	-0.1
4,639,927	-		BT3585	0.48	-2.1
4,640,020	-		BT3585	0.55	+0.9
4,640,114	+		BT3585	0.62	-1.5
4,640,115	-		BT3585	0.62	-1.3
4,640,143	+		BT3585	0.64	-1.6